Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0446 ATGGATCCACCAATTCCATCTGCATTGCCACCATCAACGCTTGATTCTGCGGCGGAACCTTCACCCTGGAATGATGAGGTTCTTCCACCTGTACCTGGTGGCAAGCTCCGCCTCATGTGCAGCTACGGCGGCCATATAATGCCACGCCCTCATGATAAGTCCCTCTGTTACATTGGTGGCGAAACCAGAATCGTTGTGGTGGATAGACTTTCCTCGCTGAAAGAACTCTACACACGCCTCTCACATACAATTCTTCATGGAAGACCCTTTAGCATGAAGTACCAGCTACCCAATGAGGACCTTGATAATCTCATCACTGTCACAAATGATGAAGACCTTGACAACATGATCGAAGAGTATGATCGAATTGCAGCCTTATCTGCCTCTGCATTGAAACCTTCAACTTCGCGACTTAGGGTGTTTTTGTTCTTCAGTAAACCAGAGGCCACGGTTTCAATGGGATCACTGCTTGATGATTCAAAGTCTGAGACGTGGTTCGTTGATGCATTGAACAATTCAGGGATCTTATCAAGGGTAGTGTCAGAATCTGCTGTAGCGGATAGCTTTGTGAACCTTGATGGTGTTAGTGTTACTGTTACTCCTAGTGCTTCAAGCAACAACTTGGAGACTCAGGCTCAGGGTGATAACAATAACAAGGTTAAGAATTTGCATGATGTGGAGAACATTTTATCAAATAGTTCTTCTCCTTCAATGGCTAATACTCTGCCTCCGATTCGGGTTCGGGTTGATGAAAATGGTCTTACTACTAGTAGGATTCAGCAAGATGAAGGGTATGTTGTTGTTTCTTCTTCTGTGACTGTGCCTGCAATCCCAGCAGCTATGATGACTACTAGTGAAAATATGAATAGGGTTGTCTCTGATGATGAAAGAACAGATCAAGGTGCACATGTTGGGTTTCGGAAACCTCCTTTGCCATTGCAGCTTGTGCAACCAAGGACTAGTGGTGGTTTGAGCTTTCCTTCTCCAGATTCAGTTACAAGTGATGGTAGTGTTGCATCTATAAATTCTTTCTCCAATGCTGTTTACTATCAAGAACAAGTCCAAGTTGCACAGATAGACAACAAAGCTAAGAGTGAAATATCTGATCACATACCAATACTACAAAGGGAACAAGTTCAGGATTCTGGTTACACATTACCCCCACAAATGGATCAAAATCAGCAACATCAACAACAATTTGTACATGCCAGCAGTCACTACATCCACCACCCTACAGCCACAGGCCAAATGCCACCGATGTCATCTTACTACCAAGTTTATGCCCAACCATCACAGCAACAACTTCACCATCCCATTGGTCAGCAGCAATACCCAGTTTATGTAATGCCTGTTGGACCTACACAGCCATACAACATAGCATTGCAATCTAATATAGGTGACCCAAATGTGGTACCCTCAGGTAGGCCACTAATACCCCACCAAAGTGTTGCTGCCACAGCAGCATACAAGGATGGCACTCCACCTATTTACCCTACTAAGTCAGTTAATCCAACAGCATACAAGGATGGTTCAAATCCTGCATTTGTTCAAATGTCAACCAATCAATTTCAGCAACAGTATGTTGGTATGCCTCAAGTCCACCATCATACACAACAGCCTATTGCTGTAGCTCCCTCAGTTACTACAAATTATGGTTATGAATATGGCGGCACTGTGCAAGACCAAGCATACTACACACAACAGCAAACTACTGCTCCATTGCCTCCTCAGTACCAATCTATGATGCCAGCAGCAGCTGCTGCAACACTATCTGATGCATCGAAACAGTTTCCTGCTGACAATATTCCGCAGCAGCCAAATAGAACTTCACAGCAGGTATAG 1842 0.4425 MDPPIPSALPPSTLDSAAEPSPWNDEVLPPVPGGKLRLMCSYGGHIMPRPHDKSLCYIGGETRIVVVDRLSSLKELYTRLSHTILHGRPFSMKYQLPNEDLDNLITVTNDEDLDNMIEEYDRIAALSASALKPSTSRLRVFLFFSKPEATVSMGSLLDDSKSETWFVDALNNSGILSRVVSESAVADSFVNLDGVSVTVTPSASSNNLETQAQGDNNNKVKNLHDVENILSNSSSPSMANTLPPIRVRVDENGLTTSRIQQDEGYVVVSSSVTVPAIPAAMMTTSENMNRVVSDDERTDQGAHVGFRKPPLPLQLVQPRTSGGLSFPSPDSVTSDGSVASINSFSNAVYYQEQVQVAQIDNKAKSEISDHIPILQREQVQDSGYTLPPQMDQNQQHQQQFVHASSHYIHHPTATGQMPPMSSYYQVYAQPSQQQLHHPIGQQQYPVYVMPVGPTQPYNIALQSNIGDPNVVPSGRPLIPHQSVAATAAYKDGTPPIYPTKSVNPTAYKDGSNPAFVQMSTNQFQQQYVGMPQVHHHTQQPIAVAPSVTTNYGYEYGGTVQDQAYYTQQQTTAPLPPQYQSMMPAAAAATLSDASKQFPADNIPQQPNRTSQQV 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0446 613 CDD PB1_UP2 39 143 - -
Lal8g0446 613 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 16 605 - -
Lal8g0446 613 Pfam PB1 domain 51 143 IPR000270 GO:0005515
Lal8g0446 613 SUPERFAMILY CAD & PB1 domains 51 154 - -
Lal8g0446 613 MobiDBLite consensus disorder prediction 1 28 - -
Lal8g0446 613 Gene3D - 55 144 - -
Lal8g0446 613 PANTHER OS05G0427100 PROTEIN-RELATED 16 605 - -
Lal8g0446 613 SMART PB1_new 50 143 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0446 Lal-Chr8 2978437 2985018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0446 35 226 MAP Kinase Kinase Kinase AT5G57610 36.318 1.78e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0446 - - lang:109357922 1080.09