Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0439 ATGAAGGATCATATCCCCTTATTATTCCTCTCTTTATTCCCCTTCTTTCTATTTACCACTTTTCCAAAATCAAACTCTCAAGAACAAGAAACAACAACCAAATATTCCAACTGTATCAAGCCATTCAACTGTGGATCATTGCCTCCAATTCTCTTTCCTTTCTGGGGTGATGTAGAACGGCCTCGTTACTGTGGTGGCAGAAATGAATTCAAGCTCAGTAACTGTAGTGATCCATACCAATACCCTTCACTTCATACTAACTCACACCAATTCCAAGTGTTTCATATTAACAGTAACAATTACACGATGGCAATGAAAATGGTGCGAGAAGATGCTGACTATGAAACTTGTGATCCTCCTTTGTCCAACAATACTCTTTCCCCAACTCTGTTTCAGTATACCCAAAACGTGTACAACATCACCGTTTTCTACGATTGTTCCTATCATGTTTCCTTTGCAAAAAACTTAACCTGCCCCTCAAATTACAACGAGTATGTATTCTACGTGGATGAAAAGATTGACCCGTACAAAATTTCCGAGCTTGAGCATATATGCGGGAATCGTAGCATACTGCATGTCATGCCTGACTCTGTTGTTGAACCTGTTGCTAGTTTTATTGATCTGAAAGAAGTGGTAGAGAAAGGGTTTGAGGTATATTATGATAGTATTAGAGAAGACGAATTGAATTGCAAGAGATGCAGGGACAGTAAAGGAATTTGTGGGAGGACAGATACTGATCAATATCAATTTTCCTGTCATTGCCCTGATGGATATGAAGCTTCTTTACAGTGTCAAAGTAACACAAAAAATCCATGGAATTGGAAAAGGAAAGTCATTATAGGCGTTAGTGCTGCTGTGTTTGGAGCACTTGTAGTGCTTTTAGCCATGTATTTATATCAACGCCGGAAAAAGAATCGTTACACCATGTCATATGTATCTCAGAGTTTCACTACTTCTGACCCATCTTTAGTAAAAGATCCTGAGAAGGGAAGTCAATACTTCGGAGTCCACGTTTTCACCTATGATGAACTTGAAGAGGCCACAAACAACTTTGACTCAGACAGAGAACTAGGAGATGGGGGCTTTGGGACAGTGTATTATGGCCAACTGCATGATGGGCGTCGTGTTGCAGTGAAGAAGTTGTATGAGAACAATTACAGGAGGGTTGAGCAATTCATGAATGAAGTTGAGATCTTGACACGCTTGCGCCATCCAAATCTTGTGTCACTATTTGGATGCACTTCTCGCCACAGCCGTGAACTTCTTCTTGTCTATGAATACATTTCTAATGGAACTGTCGCTGATCATCTTCATGGTGGGAAAACCAAACCTGGTGCACTACCTTGGCATATTAGAATGAATATTGCTGTTGATACTGCAAGTGCATTGAAATATCTTCATGCTTCTGATATCATCCACAGAGATGTAAAAACCAACAATATTCTTCTTGACGATCACTTTTGTGTCAAAGTAGCAGATTTTGGTCTATCACGCCTTTTCCCAACACATGCTACTCACATTTCAACAGCTCCACAAGGTACTCCAGGTTATGTGGATCCTGAGTACCACCAGTGTTACCAACTTACTAGCAAAAGTGATGTTTATAGCTTTGGAGTGATGCTGATTGAGTTGATATCATCTTTGCCTGCTGTTGATATCACAAGGCATAGGCATGAAATCAATTTGTCAAATATGGCCATTAACAAGATTCAAAATCAAGCGCTGCATGAGCTTGTGGATCCTGCACTTGGGTTTGAATCAGATTACAAAGTAAGGAAGATGATAAATGCTGTAGCCGAGTTAGCATTTAGGTGCTTGCAGAGTTCCAAAGATATGAGACCTTCTATGGAAGAAGTGGTGGATACTCTTTTGGATATACAAAGTGATGGCAAACATAAAAAAAGCCAACCTGAGGTGTTAGATATCTCAGCAGATGATGATGTTGTGTTGCTCAAGGATGATCCACCTCCTCCATCACCTGATTCAAACTTGGTGAGCAAATCTACAACACCAAATGCTAGTGGATAA 2028 0.4014 MKDHIPLLFLSLFPFFLFTTFPKSNSQEQETTTKYSNCIKPFNCGSLPPILFPFWGDVERPRYCGGRNEFKLSNCSDPYQYPSLHTNSHQFQVFHINSNNYTMAMKMVREDADYETCDPPLSNNTLSPTLFQYTQNVYNITVFYDCSYHVSFAKNLTCPSNYNEYVFYVDEKIDPYKISELEHICGNRSILHVMPDSVVEPVASFIDLKEVVEKGFEVYYDSIREDELNCKRCRDSKGICGRTDTDQYQFSCHCPDGYEASLQCQSNTKNPWNWKRKVIIGVSAAVFGALVVLLAMYLYQRRKKNRYTMSYVSQSFTTSDPSLVKDPEKGSQYFGVHVFTYDELEEATNNFDSDRELGDGGFGTVYYGQLHDGRRVAVKKLYENNYRRVEQFMNEVEILTRLRHPNLVSLFGCTSRHSRELLLVYEYISNGTVADHLHGGKTKPGALPWHIRMNIAVDTASALKYLHASDIIHRDVKTNNILLDDHFCVKVADFGLSRLFPTHATHISTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVMLIELISSLPAVDITRHRHEINLSNMAINKIQNQALHELVDPALGFESDYKVRKMINAVAELAFRCLQSSKDMRPSMEEVVDTLLDIQSDGKHKKSQPEVLDISADDDVVLLKDDPPPPSPDSNLVSKSTTPNASG 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0439 675 MobiDBLite consensus disorder prediction 628 652 - -
Lal8g0439 675 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 15 664 - -
Lal8g0439 675 Pfam Wall-associated receptor kinase galacturonan-binding 40 105 IPR025287 GO:0030247
Lal8g0439 675 ProSiteProfiles Protein kinase domain profile. 351 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0439 675 Pfam Protein kinase domain 352 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0439 675 MobiDBLite consensus disorder prediction 628 675 - -
Lal8g0439 675 Pfam Wall-associated receptor kinase C-terminal 164 257 IPR032872 -
Lal8g0439 675 Gene3D Phosphorylase Kinase; domain 1 324 427 - -
Lal8g0439 675 Gene3D Transferase(Phosphotransferase) domain 1 428 640 - -
Lal8g0439 675 SMART serkin_6 351 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0439 675 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Lal8g0439 675 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 664 IPR044652 -
Lal8g0439 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Lal8g0439 675 SUPERFAMILY Protein kinase-like (PK-like) 328 623 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0439 Lal-Chr8 2946994 2953237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0439 229 675 Receptor kinase-like Gene Family AT1G25390 53.377 3.42e-152 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lal8g0439 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0439 - - gmx:100794703 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0439 8 2946994 2953237 Lal8g0439 8 2946994 2953237 ECH