Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0438 ATGAAGGATCATATCTCCTTATTATTCCTCTCTCTATTCCCCTTCTTGCTATTTACCACTTTTCCAAAATCCAACTCTCAAGAACAAGAAACAACAACCAAATATTCCAACTGTATCAAGCCATTCAACTGTGGATCATTGCCTCCAATTCTCTTTCCTTTCTGGGGTGATGTAGAACGGCCTCGTTACTGTGGTGGCAGAAATGAATTCAAGCTCAGTAACTGTAGTGATCCATACCAATACCCTTCACTTCATACTAACTCACACCAATTCCAAGTGTTTCATATTAACAGTAACAATTACACGATGGCAATGAAAATGGTGCGAGAAGATGCTGACTATGAAACTTGTGATCCTCCTTTGTCCAACAATACTCTTTCCCCAACTCTGTTTCAGTATACCCAAAACGTGTACAACATCACCGTTTTCTACGATTGTTCCTATCATGTTTCCTTTGCAAAAAACTTAACCTGCCCCTCAAATTACAACGAGTATGTATTCTACGTGGATGAAAAGATTGACCCGTACAAAATTTCCGAGCTTGAGCATATATGCGGGAATCGTAGCATACTGCATGTCATGGTTGACTCTGTTGTTGAACCTGTTGCTGATTTTATTGATCTGAAAGAAGTGGTAGAGAAAGGGTTTGAGGTGTATTATGATAGTATTGAAGAAGACGAATTGAATTGCAAGAGATGCAGGGACAGTAAAGGAATTTGTGGGAGGACAGATACTGATCAATATCAATTTTCCTGTCATTGCCCTGATGGATCTGAAGCTTCTTTACAGTGTCAAAGTAACACAAGTTATTCATGGAACTGGAAGAGGAAAATCTTTATAGGTGTTATAGCTGGGGTTTCTGGATTCTTTATATGCATCATCATTATTTGTTGTTTTAGAATCAAGTCATCAACATGGAAAATAAACTTTTGGATGACAACAAAAGGTGACCAAGATATTGAAGCATTCTTAAAAAACCATGGAGATCTAAATCTGAAAAGATACAAGTTCTCAGATGTCAAGAAAATGACCAATACCTTCAAAGAAAAACTGGGACAAGGTGGTTTTGGTGCTGTTTATAAAGGAAAGCTACTCACTGGTTGTCCTGTAGCTGTAAAGATATTGATTGCATCAAAAAATAACGGAGAAGACTTTATTAATGAGGTTGCTAGCATCAGTAGAACTTCTCACGTCAACGTTGTCGCCCTCCTTGGGTTCAGTTTCGAAGGCCACAAAAAAGCTCTCATTTATGAGTTTATGGCCAATGGTTCCCTTGAAAAATTTATTTATAAAAATGTAGGTGAAACCACTCCATCATTGAGTTGGGAAATTTTGAATGATATCGCCAAGGGTATAGCTCGAGGGCTGGAATACTTGCATAGGGGTTGCAACACTCGAATTTTACATTTTGACATAAAACCACATAACATTCTTCTAGATGAGAATTTGTGTCCTAAGATATCTGATTTTGGGCTTGCAAAGCTATGTCCAAGGAAAGAGAGCATTATCTCCATGTCAGATGCTAGAGGAACAATAGGGTATGTTGCTCCAGAAGTGTGGAATAGAAATTTTGGAGGAGTTTCACATAAGTCTGATGTTTATAGCTACGGAATGATGCTGCTAGAAATGGCGGGTGGGAGGAAGAACATTAATGCTGAAGCCAGTCACTCAAGTGAGATATACTTCCCGCATTGGATATACAAAAGACTCGAGGTGGATGGTCATTTGGGACTTAATGCGGCAGTGACCACAGCAGAAGATGACATTGCAAAGAAACTGACATTGGTGGGTTTATGGTGCATTCAAACTTTTCCAAGTGATAGACCCACAATAAGTAAAGTCATAGAAATGTTGGAAGGCAACATGAATTCCTTGGAAGTGCCACCAAAACCTGTTTTATCTTCTCCTACCAGATCAGTACCTGAATCTTCCACTACTTGA 1941 0.389 MKDHISLLFLSLFPFLLFTTFPKSNSQEQETTTKYSNCIKPFNCGSLPPILFPFWGDVERPRYCGGRNEFKLSNCSDPYQYPSLHTNSHQFQVFHINSNNYTMAMKMVREDADYETCDPPLSNNTLSPTLFQYTQNVYNITVFYDCSYHVSFAKNLTCPSNYNEYVFYVDEKIDPYKISELEHICGNRSILHVMVDSVVEPVADFIDLKEVVEKGFEVYYDSIEEDELNCKRCRDSKGICGRTDTDQYQFSCHCPDGSEASLQCQSNTSYSWNWKRKIFIGVIAGVSGFFICIIIICCFRIKSSTWKINFWMTTKGDQDIEAFLKNHGDLNLKRYKFSDVKKMTNTFKEKLGQGGFGAVYKGKLLTGCPVAVKILIASKNNGEDFINEVASISRTSHVNVVALLGFSFEGHKKALIYEFMANGSLEKFIYKNVGETTPSLSWEILNDIAKGIARGLEYLHRGCNTRILHFDIKPHNILLDENLCPKISDFGLAKLCPRKESIISMSDARGTIGYVAPEVWNRNFGGVSHKSDVYSYGMMLLEMAGGRKNINAEASHSSEIYFPHWIYKRLEVDGHLGLNAAVTTAEDDIAKKLTLVGLWCIQTFPSDRPTISKVIEMLEGNMNSLEVPPKPVLSSPTRSVPESSTT 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0438 646 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 646 IPR045874 GO:0004672
Lal8g0438 646 ProSiteProfiles Protein kinase domain profile. 345 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0438 646 Gene3D Phosphorylase Kinase; domain 1 320 419 - -
Lal8g0438 646 MobiDBLite consensus disorder prediction 626 646 - -
Lal8g0438 646 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Lal8g0438 646 Gene3D Transferase(Phosphotransferase) domain 1 420 633 - -
Lal8g0438 646 Pfam Wall-associated receptor kinase galacturonan-binding 40 105 IPR025287 GO:0030247
Lal8g0438 646 SUPERFAMILY Protein kinase-like (PK-like) 332 619 IPR011009 -
Lal8g0438 646 Pfam Protein kinase domain 347 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0438 646 SMART serkin_6 345 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0438 646 Pfam Wall-associated receptor kinase C-terminal 164 257 IPR032872 -
Lal8g0438 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Lal8g0438 646 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 9 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0438 Lal-Chr8 2942201 2949503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0438 38 645 Receptor kinase-like Gene Family AT1G66910 40.406 3.24e-142 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lal8g0438 Pkinase 6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0438 - - gmx:100792936 659.062