Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0434 ATGGGATTTCTCTCCAGGTTTTGCAACTGCTTGGAGAAGCGCGCCGCAACCTCCGACAATGACGGCGACGATCCCGACGGCGACTCTTTTGATCTCATATTCGAACTCCATACTCTTCAGCTCGCTACCAATTTCTTCTCTCACCTCAACCAGCTTGGTCATGGTGGCTTTGGTCCTGTCTTCAAGGGGTTGATGCCAAATGGCCAAGAAGTAGCTGTTAAGAAGCTGTCATTAGAATCGAGGCAAGGAGTTAGAGAATTTACTAATGAAGTCAGGCTATTATTGAGAATTCAGCACAAGAACCTGGTTATGTTATTGGGTTGCTGTGCAGAAGGGCCTGAAAAGATGCTAGTCTATGAGTATCTTCCTAACAAAAGCCTGGATCACTTTCTGTTTGATAAAACGAAATCTCCATCTTTGGATTGGACAACACGATTTAGAATAATTATTGGTGTGGCAAGAGGACTTCTCTACTTGCATGAAGAGGCTCCGGAAAGAATTATTCACAGAGACATTAAAGCTAGTAACATATTGCTGGATGAGAAATTAAATCCGAAAATTTCAGACTTTGGCTTGGCAAGGCTATTTCCTGGGGAGGACACTCATGTGCAGACATTTAGGGTTTCTGGTACACATGGTTACATGGCCCCTGAATATGCGATGCATGGATATTTATCTGTGAAGACAGATGTGTTCAGTTATGGAATCCTGTTGTTGGAAATAGTTAGTGGGAGAAAAAACCATGATAAGCAGCTTGGTAAAGAGAAGGCAGATCTCTTGAACTATGCATGGATGCTTTATGAGGGAGGGAAGATTATTGATTTAATTGACTCAAATCTTGGTAAATGCAACGGCGATGAAGCAGCAATGTGCATTCATTTGGGTTTGTTGTGCTGTCAAGCGAGTATAGCGGATAGACCTGACATGAATTCAGTTCATCTGATGCTCTCAAGTGATTCCTTCACTTTGCCAAGAGCAGGTAAACCTGGAATTCATGGTCGAGTAGGACATTGGACTACAACCACAACTTCTGCTTTCACCAACACTAATGCTAGTAGTGCAACCAAGACTCCAGGAGGGAGTAGTAGTTTTGCAGATGATTATTCTAGAAATTCTATCTCTACTTCTTTTGATGAAGGCCGATGA 1146 0.4258 MGFLSRFCNCLEKRAATSDNDGDDPDGDSFDLIFELHTLQLATNFFSHLNQLGHGGFGPVFKGLMPNGQEVAVKKLSLESRQGVREFTNEVRLLLRIQHKNLVMLLGCCAEGPEKMLVYEYLPNKSLDHFLFDKTKSPSLDWTTRFRIIIGVARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLARLFPGEDTHVQTFRVSGTHGYMAPEYAMHGYLSVKTDVFSYGILLLEIVSGRKNHDKQLGKEKADLLNYAWMLYEGGKIIDLIDSNLGKCNGDEAAMCIHLGLLCCQASIADRPDMNSVHLMLSSDSFTLPRAGKPGIHGRVGHWTTTTTSAFTNTNASSATKTPGGSSSFADDYSRNSISTSFDEGR 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0434 381 Pfam Protein tyrosine and serine/threonine kinase 49 251 IPR001245 GO:0004672|GO:0006468
Lal8g0434 381 ProSiteProfiles Protein kinase domain profile. 46 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0434 381 Gene3D Transferase(Phosphotransferase) domain 1 122 322 - -
Lal8g0434 381 SUPERFAMILY Protein kinase-like (PK-like) 34 325 IPR011009 -
Lal8g0434 381 MobiDBLite consensus disorder prediction 348 381 - -
Lal8g0434 381 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 378 - -
Lal8g0434 381 Gene3D Phosphorylase Kinase; domain 1 20 121 - -
Lal8g0434 381 CDD STKc_IRAK 52 316 - -
Lal8g0434 381 SMART serkin_6 46 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0434 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Lal8g0434 381 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0434 Lal-Chr8 2920626 2924401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0434 24 333 Receptor kinase-like Gene Family AT4G11490 50.637 3.32e-110 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal8g0434 PK_Tyr_Ser-Thr 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0434 - - gmx:100790304 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0434 8 2920626 2924401 Lal8g0434 8 2920626 2924401 ECH