Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0433 ATGTACACATCAAGGAAGAAAATCCACAAGGATAAGGATGCCGAGCCAACTGAATTTGAAGAGACTGTTGGACAGGCTTTGTTTGATCTAGAAAACACTAACTCTGACTTGAAAAGTGAACTGAAAGATTTGTACATCAATTCAGCAGTCCAAGTTGATGTTTCTGGGAACCGCAAGGCTGTGGTTATCCATGTCCCCTACAGATTAAGGAAAGGTTTCAGGAAGATTCATGTCAAGCTTGTCAGAGAGCTTGAGAAGAAATTCAGTGGAAAGGATGTGGTCGTGATTGCCACCCGGAGGATAGTGAGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGTCCCCGCAGCCGTACACTCACTGCTGTGCATGAGGCAATTCTGGAGGATGTTGTCTTGCCTGCGGAGATTGTTGGGAAGCGTACTAGGTATAGACTCGATGGATCCAAGATTACCAAGGTTTTCTTGGACCCAAAGGAAAGAAACAACACTGAGTACAAGTTGGAGACTTTTTCTGCAGTCTACAGGAAACTTTCAGGCAAAGATGTTGTGTTTGAGTATCCTATCACAGAGGCTTAG 576 0.4479 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTNSDLKSELKDLYINSAVQVDVSGNRKAVVIHVPYRLRKGFRKIHVKLVRELEKKFSGKDVVVIATRRIVRPPKKGSAVQRPRSRTLTAVHEAILEDVVLPAEIVGKRTRYRLDGSKITKVFLDPKERNNTEYKLETFSAVYRKLSGKDVVFEYPITEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0433 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lal8g0433 191 Coils Coil 27 47 - -
Lal8g0433 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lal8g0433 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Lal8g0433 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0433 Lal-Chr8 2918902 2921112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0433 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 79.058 4.30e-114 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0433 K02993 - gmx:100527642 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0433 8 2918902 2921112 Lal8g0433 8 2918902 2921112 ECH