Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0429 ATGGTGGAAAATCAACCTCCTGGCTTCAGGTTCCACCCTACAGATGAAGAACTCATCACATATTATCTTACAAGGAAAGTGACTGATACTAGTTTCACATGCAAAGTTATAACTGCTGTTGATCTCAACAAGTCTGAACCTTGGGACCTCCCAGGCAAGGCCTCAATGGGGGAGAAGGAATGGTATTTCTTCAATATGAGGGACAGAAAATATCCAACTGGACTTAGAACTAATCGAGCCACTGAATCAGGGTACTGGAAAACGACAGGGAAAGATAGAGAGATATTTCGTGCTGGGGTTTTGATAGGAATGAAGAAAACCCTAGTCTTTTATAAGGGTAGAGCTCCAAAGGGTGAAAAAAGCAATTGGGTTATGCATGAATATCGACTAGAAAACAAACATCTCTTTGCACCTTCAAAGGACGAATGGGTGGTTTGTAGGGTTTTCCAAAAGAGCACAACAGCAAAAAAACCACAACAGACAATGATATCATCCTCCCAACCAGAGTCCCCATGTGACACAACCTCAATGTTCAATGAATTTGGTGATGTTGATCTTCCCAATAATATAAACAACAATATTGTAAATTCATCAACTGCATTCACTAACATTAATTTAGGACAACCTTACAATACTGATCTTACCAATGTCAACACAAATATGAACTTGACCATGAATTGGCCAAGTGAAGTTCCTTCTATTCCATCTCTCTCATGGCCTTCAGGGTTGTTGAATCCAAATAATATTTCTATAGATTCCTTGCTTCTCAAGGCATTACAGCTTAGAAGCTATCAACAACAAAGAGAAGCTGCTGCTGTTGCAGCTACTGATCATTTTGCATCATATAATAATATGACTCAACAAGGACTTTCCCTACTTGGAACTCATGACCTAGGTTCATCAAATCTCAATGCTTCTTCTTCTTCTTCTAAAGTTTTAGAATGTATGCCACAACAGCAGCAGCAACAACAGGAGCAACCGTTCAATTTGGACTCCATTTGGTGA 1005 0.395 MVENQPPGFRFHPTDEELITYYLTRKVTDTSFTCKVITAVDLNKSEPWDLPGKASMGEKEWYFFNMRDRKYPTGLRTNRATESGYWKTTGKDREIFRAGVLIGMKKTLVFYKGRAPKGEKSNWVMHEYRLENKHLFAPSKDEWVVCRVFQKSTTAKKPQQTMISSSQPESPCDTTSMFNEFGDVDLPNNINNNIVNSSTAFTNINLGQPYNTDLTNVNTNMNLTMNWPSEVPSIPSLSWPSGLLNPNNISIDSLLLKALQLRSYQQQREAAAVAATDHFASYNNMTQQGLSLLGTHDLGSSNLNASSSSSKVLECMPQQQQQQQEQPFNLDSIW 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0429 334 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Lal8g0429 334 MobiDBLite consensus disorder prediction 303 334 - -
Lal8g0429 334 PANTHER BNACNNG63190D PROTEIN 2 264 - -
Lal8g0429 334 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Lal8g0429 334 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 264 - -
Lal8g0429 334 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Lal8g0429 334 Gene3D NAC domain 14 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0429 Lal-Chr8 2880130 2882888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0429 1 334 NAC Transcription Factor Family AT3G18400 57.310 1.83e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal8g0429 NAM 6.3e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0429 8 2880130 2882888 Lal8g0429 8 2880130 2882888 ECH
Lal8g0429 8 2880130 2882888 Lal10g0979 10 17056957 17059651 LSH