Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0424 ATGTCAAAGGCAAGGGACAGGACCGAAGATTTCAAAGATGCTGTGCGTCACACTTGTCACTCGTTAGGCTTCGATGAGGCTAAATTGGCATCTGTTATGGCATCTTTCATTATTCATAAACCTTGGCAAAGGTCACCATTTTCCAAAGCGGCGCTGAAGACGCTCGAGAGTATTGGAGAACTGGAACAGTTTCTGTTGAAGCACAGAAAGGATTATACGGATCTGCACCGCACAACTGAACAGGAGAGAGATAGCATTGAGCATGAAGTTAGTTCTTTTATTAAAACTTGTCAGGAACAAATTGATGTTCTTAAGAATAGTATAAATGAAGAGGAAAGCTCAAAAGGCTGGCTTGGTACTGCAAGTGCAAAGTCTAATGCTGACACCATTGCACACAAGCATGGGGTGGTTCTGATTTTAAGTGAGAGACTTCACTCAGTTTCAGCACAATTTGATCAGCTTAGAGCTGTACGCTTCCAGGATGCTATTAACAGGGCAATACCACGGAGAAAACTTAACCGTGTAACCAAGAAAGAGCCTGCAGAAACCCCTAATTTGGGTGACATGGAGTTCAAAGAACACGATGAGTTACACAATGAGCCTCTAAGGGTCCAGCAACAACTCTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTGACTGGTCTTCTAGATACAGTTCAAGAAACAGAAACTAGGATGGTGGAAATGTCTGCACTAAATCACCTCATATCTACCCATGTTCTGCATCAAGCTCAGCAAATTGAGCATCTGTATGAGCAGGCTGTTGAAGCTACTATGAATGTTGAGCTTGGTAATAAAGAACTCTCACAAGCCATTCAGAGGAATAGCAGTAGCAGGACATTTCTCTTACTGTTTCTATTTGTCCTCACTTTTTCCATTCTTTTTCTTGATTGGTACAGTTAA 927 0.4218 MSKARDRTEDFKDAVRHTCHSLGFDEAKLASVMASFIIHKPWQRSPFSKAALKTLESIGELEQFLLKHRKDYTDLHRTTEQERDSIEHEVSSFIKTCQEQIDVLKNSINEEESSKGWLGTASAKSNADTIAHKHGVVLILSERLHSVSAQFDQLRAVRFQDAINRAIPRRKLNRVTKKEPAETPNLGDMEFKEHDELHNEPLRVQQQLLDDETRALQVELTGLLDTVQETETRMVEMSALNHLISTHVLHQAQQIEHLYEQAVEATMNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0424 308 Coils Coil 94 114 - -
Lal8g0424 308 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Lal8g0424 308 PANTHER SYNTAXIN-18 5 308 - -
Lal8g0424 308 PANTHER SYNTAXIN-18 5 308 - -
Lal8g0424 308 Gene3D - 214 305 - -
Lal8g0424 308 SUPERFAMILY t-snare proteins 56 272 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0424 Lal-Chr8 2856552 2861308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0424 65 308 SNARE and Associated Proteins AT1G51740 73.577 4.28e-110 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0424 K08492 - gmx:100778011 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0424 8 2856552 2861308 Lal10g0984 10 17094898 17098653 LSH