Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0407 ATGGCAAGTCGGTTGAAGGAAGATGAAAAAAACGAACGCATAATTCGAGGTCTTCTCAAGCTTCAACATAATCGAAGATGCATTAACTGCAATAGCGTGGGACCACAATATGTATGCACAAATTTCTGGACGTTTATTTGCACAAACTGTAGTGGAATGCACCGGGAATTTACACATCGAGTGAAATCTGTTTCAATGGCTAAATTTACGTCACAAGAAGTTAGTGCACTTCAAGAAGGAGGGAATCAGCGTGCAAAAGATTTTTTTTTTAAAGAATGGGATGCGCAGAGACATTCTTTCCCCGATAGCAGTAATGTTAACAGGCTCCGAGACTTTATTAAGCATGTTTATGTTGAAAGAAGATTCACCGGAGAGGGGACCTATGACAAAGCATCGAAAACAACAGTGGGTGACAAAGACAATTCCTATGAAAACAAGAGAGCTGAGACGGATCATGGAGGACCTAAAAGCCCTACATATGAACGTCAATATGATGACAGTTCTAATTCCAGTGGAAGAAGTCCTGGATCTGATCAAGAAAGTAGGCAATATGGTGATTATCGGAGAGGTTCAGCTTATCCTTCTGTTGTCAATGATTGGCGTCGTGAAGATCGTAAAATATCTGAGGAAAGCCAATCACCTGAGCGAGCCAAAGATCTGGGTTCTTCTAGCTCACCTGTGGTCCGTCCTGTTAGAGATATTTTGGGAGAAAATGTAATACCTCTTCGGATAAGTGAACCCCCTAAAGCAAACAGTGGAAGAGCTTCTGATGGCTCAGCACTGGCACAGAGAACTGCATCTTCAAGTAACTTGGCATCCAGCAAAGCAAACCCAGCACCAGAAGATGTTAAGCTTCAGACTATAAAGAGCCTTATTGATTTTGACGATGATCCTGAACCTCCTGTTGCTCCAGCAATTCCTCAAGCTCAACAAACTACTATGCTTCAACCTGCTGTGCAACCAGCAAATCCCAGTGATGATAATTGGGCCTCTTTTGATGTTGCCCCTGAGGCAAAAGTAACTCCAAGCCCAGCAAATATAAATACACTTGAATCTGTGCTGTCTCAGTTTTCAGTGCCAGCATCTTCATCTGCTCATGTTCCTGAAGTCCAAGGTGGTCCAAATGTTGCAATAGCTAATTCAGGACAGTGGGCTAGTTTTCACCATCAACAACCATTGTTCCCTGCTACTGCTAGTCCATCTACCACTCAACAATTTGCACCACCACCTGTTGGTGGAACTGCGTCTAATCAGCCATGGAATATACCACCCACAGTACAAGGGCATCCAAGCACACCTATGTCACATGCATACCATCATGCCTCAAATCCCGTTAATGAGGCTATATCCAATGTTGTTTCACAACCTTCCACTGTAGAAATAAATAGTGGAAGAAAAGCACTTCCTGAGGATCTGTTCACTGTAAACTATTCATCCTTCCCTGCTCCAGTTAGAGGTTGGCAAATGAGTTTTCCCCACGGCATGGGTATCCCAATGCAATACAATAATGTGCCCATGGCAAGTTTCCCGCAGCCATCAAAATCAACAAATCCATTTGATGTTGGCAGTGAATACACCCCAGATCAAGCCCCAACTTTTCCTTCTATGTCATCCTTGCAAGGTGCTCTGCCTAGTTTAGCACCTCCGGCAGCAATGCAACCTTCAGGCCTGGGTTATCCATCATATGCGTGGACTCCACCTCCATCTTCGTCATATGCATCAGTCCCACGTCCACAAGCACAAATTGATGCATCAGCTTTTGAACCAAGGGCATACATGGGACAACAAATGCCAGCCAATATGGGACACCAAATGCGAATCAATATGGGACAGCACATGCCAACTAACATTCCAATACCAAGGCAACAAGTTGGCAGTTTTGGTGCTGGCGGAACTGTTTTTGGCTTGTCGAATCCAGATCAGCAGCTGACCGAAGGATCATCAACCAATTCCAACCCTCATCCCTTTCCCGGAGGAGGGAACCCATTTGGATGA 1995 0.4451 MASRLKEDEKNERIIRGLLKLQHNRRCINCNSVGPQYVCTNFWTFICTNCSGMHREFTHRVKSVSMAKFTSQEVSALQEGGNQRAKDFFFKEWDAQRHSFPDSSNVNRLRDFIKHVYVERRFTGEGTYDKASKTTVGDKDNSYENKRAETDHGGPKSPTYERQYDDSSNSSGRSPGSDQESRQYGDYRRGSAYPSVVNDWRREDRKISEESQSPERAKDLGSSSSPVVRPVRDILGENVIPLRISEPPKANSGRASDGSALAQRTASSSNLASSKANPAPEDVKLQTIKSLIDFDDDPEPPVAPAIPQAQQTTMLQPAVQPANPSDDNWASFDVAPEAKVTPSPANINTLESVLSQFSVPASSSAHVPEVQGGPNVAIANSGQWASFHHQQPLFPATASPSTTQQFAPPPVGGTASNQPWNIPPTVQGHPSTPMSHAYHHASNPVNEAISNVVSQPSTVEINSGRKALPEDLFTVNYSSFPAPVRGWQMSFPHGMGIPMQYNNVPMASFPQPSKSTNPFDVGSEYTPDQAPTFPSMSSLQGALPSLAPPAAMQPSGLGYPSYAWTPPPSSSYASVPRPQAQIDASAFEPRAYMGQQMPANMGHQMRINMGQHMPTNIPIPRQQVGSFGAGGTVFGLSNPDQQLTEGSSTNSNPHPFPGGGNPFG 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0407 664 MobiDBLite consensus disorder prediction 635 656 - -
Lal8g0407 664 PANTHER ARFGAP/RECO-RELATED 606 664 IPR044820 GO:0005096
Lal8g0407 664 PANTHER ARFGAP/RECO-RELATED 377 602 IPR044820 GO:0005096
Lal8g0407 664 PANTHER ARFGAP/RECO-RELATED 1 372 IPR044820 GO:0005096
Lal8g0407 664 MobiDBLite consensus disorder prediction 256 276 - -
Lal8g0407 664 CDD ArfGap_AGFG 12 122 - -
Lal8g0407 664 MobiDBLite consensus disorder prediction 128 159 - -
Lal8g0407 664 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Lal8g0407 664 PANTHER ARF GTPASE ACTIVATOR 377 602 - -
Lal8g0407 664 PANTHER ARF GTPASE ACTIVATOR 1 372 - -
Lal8g0407 664 PANTHER ARF GTPASE ACTIVATOR 606 664 - -
Lal8g0407 664 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Lal8g0407 664 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Lal8g0407 664 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Lal8g0407 664 MobiDBLite consensus disorder prediction 393 436 - -
Lal8g0407 664 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Lal8g0407 664 MobiDBLite consensus disorder prediction 161 181 - -
Lal8g0407 664 MobiDBLite consensus disorder prediction 198 216 - -
Lal8g0407 664 MobiDBLite consensus disorder prediction 630 664 - -
Lal8g0407 664 MobiDBLite consensus disorder prediction 128 229 - -
Lal8g0407 664 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Lal8g0407 664 Gene3D Arf GTPase activating protein 2 135 IPR038508 -
Lal8g0407 664 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 134 IPR001164 GO:0005096
Lal8g0407 664 MobiDBLite consensus disorder prediction 244 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0407 Lal-Chr8 2746834 2753824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0407 15 156 C2H2 Transcription Factor Family AT3G07940 30.357 1.65e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0407 - - lang:109358573 1106.66