Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0403 ATGGATGATATGGAAGATGACGCAAGGTATCCTCCAAAGTCGTTCTCTTTGAACCGCCAAAACCCTTCACATCGGCAGAAACACCCAATTGGAGGAACCCCTTGTCATCACCATCGCCCAATTCCCACTCGTTATGTAGAAGAACCCGATGAAGACGAAGAACAAGAGGAATTCGACGATTATGAAGCCGGAGAAGACGAATTCGACCAAGAGGAAAATGGGTATTGTGGTAATTTCGAAAATGATGATGAGTTCGGTAGGAACTCGAACAAGAAGAGGAAGGTACGAGGTGGTCCCTCTGTTTCAAACTATGAGCTTGCGCCACACTTGAAAACTGTGTATAATCGAAGTTCTGAAGATAATTGGACAGAACATGCAACATTTGTGTTGTTGGAGGTTTGGGGGGACAAGTTCCTTCAACTTGGGAGGAACAGTTTGAGGTCTGATGATTGGAACGACGTTGCCGAGAAGGTTTCGGAGGAATTGAAGGTGGAAAGGAATGTTTTTCAATGTAGGAACATGTTGGATAAGCTGAAACGTAGGTATAAGAAAGAAAAGGCTAGAATTGATGAAATGTGTTTGAATACTAGTAAATGGGCTTATTTCAAGAAAATGGATATGTTGATGGCTTCTTCTGCAAGGCAAGAGTATGGTCTAGCTTGTGGTGTTGATTCGGGTGAGTATGTGTTTCTGAATACAAGGGTGTATTTGAATAAGTCCAATGGGTTTGATGAGATGAGGGATAGTCCTGGTGAGAGTGAGACTGATGAGGATAATGATGATTCGAAGACGGCAGTTAAAGTTGGTGGTGATGAGGATGATGAGACTTCGTATCGGGTGCTGGCCGATTCGATTCAGAAGTTTGGGAAGATTTATGAAAAGATTGAGAATAGTAAGAGGGAGCAGATGATGGAGTTGGAGAAAATGAGGTTGGATTTTAATAGGGATTTGGAGCTGCAGAAGAAGCAGATTTTGGAAAGGGCTCAGACCGAGATAGCTAAAATACAGAAAGTGAATGAGGATGATACAGAAACTTCTACTGAGAATCTCAGCGAATGA 1059 0.4249 MDDMEDDARYPPKSFSLNRQNPSHRQKHPIGGTPCHHHRPIPTRYVEEPDEDEEQEEFDDYEAGEDEFDQEENGYCGNFENDDEFGRNSNKKRKVRGGPSVSNYELAPHLKTVYNRSSEDNWTEHATFVLLEVWGDKFLQLGRNSLRSDDWNDVAEKVSEELKVERNVFQCRNMLDKLKRRYKKEKARIDEMCLNTSKWAYFKKMDMLMASSARQEYGLACGVDSGEYVFLNTRVYLNKSNGFDEMRDSPGESETDEDNDDSKTAVKVGGDEDDETSYRVLADSIQKFGKIYEKIENSKREQMMELEKMRLDFNRDLELQKKQILERAQTEIAKIQKVNEDDTETSTENLSE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0403 352 Gene3D - 122 184 - -
Lal8g0403 352 MobiDBLite consensus disorder prediction 260 274 - -
Lal8g0403 352 Pfam Myb/SANT-like DNA-binding domain 119 207 IPR044822 -
Lal8g0403 352 Coils Coil 325 345 - -
Lal8g0403 352 MobiDBLite consensus disorder prediction 242 274 - -
Lal8g0403 352 MobiDBLite consensus disorder prediction 1 102 - -
Lal8g0403 352 MobiDBLite consensus disorder prediction 47 78 - -
Lal8g0403 352 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 39 346 - -
Lal8g0403 352 Coils Coil 175 195 - -
Lal8g0403 352 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 39 346 IPR044823 -
Lal8g0403 352 Coils Coil 292 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0403 Lal-Chr8 2717097 2718155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0403 278 337 Trihelix Transcription Factor Family AT3G14180 40.000 4.94e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal8g0403 Myb_DNA-bind_4 7.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0403 - - ccaj:109813475 478.018