Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0401 ATGAATGATCCCACTAATGGTCACGCTACCTCTTCCTTCAAGCTACCCTCTATCAACTTCACTAAGCTTTTCATCAATGGACAATTTGTTCATTCCATTTCAGGAAAGGAGTTTGAGACAATTGATCCAAGAACAGAGGAGGTAATAGCAAAAGTCTCAGAGGGAAGAAAAGAAGATATTGATGTTGCTGTGAAGGCGGCACGTGCTGCTTTTGATCATGGTCCATGGCCCCGCATGCCCGGCGCTGAAAGAGCAAAAATAATGATGAAATGGGCAGACATAATTGATCAAAACATAGAAGAGTTAGCAGCATTAGATACCATTGATGCTGGAAAGTTGTACAATTGGGGTAAAACTGTTGATATTCCCGGTGTAGCAAATACTATAAGATACTATGCTGGTGTTGCTGATAAAATTCATGGAGAGGTTTTAAAACCATCTAGGGAGTTGCATGCATATACTTTGATGGAACCAATTGGTGTAGTTGGACACATTATTCCCTGGAATTTCCCTAGCGCCATGTTCGCCGTCAAGGTTGCTCCTACCTTGGCTGCAGGGTGTACCTTGGTCCTCAAGCCTGCTGAACAAACACCTCTTTCAGCTTTGTTTTATGCTCATCTAGCTAAGCAGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTACCCGGATTTGGCCCAACTGCAGGAGCTGCAATAAGCTCACACATGGACATAGATAAGGTTAGCTTTACTGGTTCAACAGAGGTAGGGCGCGAAGTAATGCAGGCGGCAGCTAGGAGTAATTTAAAACCAGTTTCACTTGAATTAGGAGGCAAATCACCTCTTGTAATTTTTGATGATGCTGATGTAGATAAAGCTGCTGAGCTTGCTCTCTTGGGTATCCTATACAACAAGGGGGAAATTTGTGTTGCTAGTTCCCGTGTGTTTGTTCAGGAAGGTATCTATGATGAATTTGAGAAGAAATTGGTGGAGAAGGCGAAGGCTTGGGTTGTCGGGGATCCTTTTGATCCTAAATCTCAGCAAGGACCTCAAGTTGACAAGAAGCAATTTGAAAAAATTATTTCCTATATTGAGCATGGAAAGAGAGAAGGAGCCACCCTTTTGACAGGGGGCAAGAGAGTGGGAGGCAAGGGCTACTACATTGAACCTACAATTTTCTCCAATGTTAAGGAGGACATGGTGATAGTGCAGGATGAAATATTTGGCCCTGTGATGTCACTGAAGAAGTTTAAGAGCATTGAGGAAGGAATAAGGAGTGCTAACAATACAAAATATGGGCTAGCAGCAGGAATTGTGACTAAGAACTTGGATACAGCAAACACTGTGTCAAGGTCCATTCGTGCAGGCATAGTGTGGATAAACTGTTATTTTGCCTTTGGGAATGATATTCCTTATGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTTTGGATTGGAAGCCCTACACAAGTACCTACAAGTTAAATCTGTTGTAACACCCATTTACAATTCTCCTTGGCTTTGA 1506 0.4263 MNDPTNGHATSSFKLPSINFTKLFINGQFVHSISGKEFETIDPRTEEVIAKVSEGRKEDIDVAVKAARAAFDHGPWPRMPGAERAKIMMKWADIIDQNIEELAALDTIDAGKLYNWGKTVDIPGVANTIRYYAGVADKIHGEVLKPSRELHAYTLMEPIGVVGHIIPWNFPSAMFAVKVAPTLAAGCTLVLKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGREVMQAAARSNLKPVSLELGGKSPLVIFDDADVDKAAELALLGILYNKGEICVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKSQQGPQVDKKQFEKIISYIEHGKREGATLLTGGKRVGGKGYYIEPTIFSNVKEDMVIVQDEIFGPVMSLKKFKSIEEGIRSANNTKYGLAAGIVTKNLDTANTVSRSIRAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGLEALHKYLQVKSVVTPIYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0401 501 SUPERFAMILY ALDH-like 15 497 IPR016161 GO:0016491
Lal8g0401 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Lal8g0401 501 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 4 501 - -
Lal8g0401 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 501 - -
Lal8g0401 501 Pfam Aldehyde dehydrogenase family 31 491 IPR015590 GO:0016491
Lal8g0401 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Lal8g0401 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Lal8g0401 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0401 Lal-Chr8 2706495 2710197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0401 2 501 Aldehyde Dehydrogenase Gene Family AT3G24503 72.255 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0401 K12355 - gmx:100783920 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0401 8 2706495 2710197 Lal10g1002 10 17217674 17223629 LSH