Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0393 ATGTCTACAGCAGCCGCTCCCTCTTCTCCGCCGGCTTCAAACACCACCACTCCTCCGCCGTCAACTCCGGCCACACCCTCTGAACCACCAAATACTACTCCTTCAACACCACCACCTGATACTCCCTCTGCGCCACCACCGGCGACTCCATCTGCGCCACTACCGGCGACTCCATCTGCGCCGCTACCGGCGACTCCATCTGCATCACCACCTGCTCCAACAACTCCGTCAGCCTCACCACCTGCTCCAACCACTCCATCAACCTCACCACCGTCTCAATCTCCACCATCACTTTCACCTCCATCTCCAGGCGGTGGTAAATCTCCTCCGGCGCCACCGTCTCGGACCTCCCCACCACCTCCACATTCCCCTTCCACCCCGAAAACCCCATCTTCGTCTAAGTCTCCAACGTCGCCGCCGTCACCATCCGGATCGAGCATCTCCACCGGATTGGTGGTCGGAATCGCCGCTGGAGCGGTGGCGGTGGTGGTACTGCTGAGCATTTTGTGCATATGTTGTAGAAAAAAGAAGAGAAGACGCGATGAAGAGCAATATTATCCTCCTCCTCCACCACAACATCAATATCAACACAAAGTTGAGCCATATGGCGGTCCCCCACGTCAATGGCAGTACAATGCTCCTCCACCTTCAGACCATGTAGTTCCGGTGATGCCTAAGCCGTCTCCTATGCCTCCGCTTGCATCAAGTGGTGGACAATCATCCCAAATGTCAGTGTATGCTCCTGCTCAACCTCCGCCACCTCCACCTTTTCTTAGCAGCAGTTTTGAGTCTGGATCAAACTATTCAGCTGGTGAACGACTTCCACCACCTTCTCCAGCACTTTCATTGGGCTTCATTAAGAGCACATTTTTATATGAGGAGTTGCTGTCTGCGACCGATGGCTTTTCTGATGCCAACCTCCTTGGATCAGGTGGGTTCGGTTATGTGCATAGAGGAATTCTTCCCAGCGGAAAGGAGGTTGCTGTTAAGCAGCTTAAGGCCGGAAGCGGGCAAGGGGAGCGTGAATTTCAAGCTGAAGTTGAAATAATTAGCCGCGTTCACCATAAACATCTTGTTTCTTTGGTGGGGTACTGCATCAATGGTACCCGTAGGCTGCTTGTTTATGAATTTGTTCCCAACAATACATTGGAATTCCATTTACATGGAAAGGGGAGACCTACCATGGATTGGTCCACAAGACTGCGAATTGCTTTAGGATCTGCAAAAGGACTGGCATATCTTCATGAGGATTGTCATCCTAAGATCATCCATCGTGATATCAAAGCTGCTAACATCCTTCTGGACTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGGCTTGCAAAGATTGCTTCTGAAGTCAACACTCATGTTTCCACTCGAGTGATGGGGACTTTTGGGTATCTTGCTCCAGAGTATGCTTCTACTGGAAAACTAACTGACAAGTCTGATGTGTTCTCCTACGGAGTCATGCTTCTTGAGTTAATAACTGGAAGACGGCCAGTTGATAAACATCAAAGCTACACAGAGGACAGTTTGGTGGACTGGGCTAGGCCTTTGCTCACACGTTCTTTGGAAGAAGACGATTTTGATTCTCTGGTTGACCCAAGGCTCCAGAATGAAATTAATCGGAATGAGCTGGCTCGGATGGTGGCTTGTGCTGCAGCTTGCATACGTTATTCAGCAAAACGTCGACCTAGGATGAGCCAGGTTGTGCGTGCTCTGGAAGGAGTTGTGTCTCTAGAAGATCTTAATGATGGAGTTAGACCTGGACACAGCACTGCATACAGTTCTTACGGAAGCTCAGATTACGACACTTCGCAATACAAGGAGGACATGAAAAAGTTCCGAAAAGCAGCACTTGAGGGAACCGAGGAATATGGTGGCAGCAGTGGGTACAGTGCGCCAACAAGCGAGTATGGTTTATACCCATCTGGCTCAAGCAATGAAGGGCAGAGCCGCCAAACCACCAGAGAAATGGAAATGAATATGAAGAATGGCCAAGGTTTCAATAGTAGAAAACCTTGA 2028 0.4995 MSTAAAPSSPPASNTTTPPPSTPATPSEPPNTTPSTPPPDTPSAPPPATPSAPLPATPSAPLPATPSASPPAPTTPSASPPAPTTPSTSPPSQSPPSLSPPSPGGGKSPPAPPSRTSPPPPHSPSTPKTPSSSKSPTSPPSPSGSSISTGLVVGIAAGAVAVVVLLSILCICCRKKKRRRDEEQYYPPPPPQHQYQHKVEPYGGPPRQWQYNAPPPSDHVVPVMPKPSPMPPLASSGGQSSQMSVYAPAQPPPPPPFLSSSFESGSNYSAGERLPPPSPALSLGFIKSTFLYEELLSATDGFSDANLLGSGGFGYVHRGILPSGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCINGTRRLLVYEFVPNNTLEFHLHGKGRPTMDWSTRLRIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASEVNTHVSTRVMGTFGYLAPEYASTGKLTDKSDVFSYGVMLLELITGRRPVDKHQSYTEDSLVDWARPLLTRSLEEDDFDSLVDPRLQNEINRNELARMVACAAACIRYSAKRRPRMSQVVRALEGVVSLEDLNDGVRPGHSTAYSSYGSSDYDTSQYKEDMKKFRKAALEGTEEYGGSSGYSAPTSEYGLYPSGSSNEGQSRQTTREMEMNMKNGQGFNSRKP 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0393 675 MobiDBLite consensus disorder prediction 630 675 - -
Lal8g0393 675 ProSiteProfiles Protein kinase domain profile. 302 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0393 675 MobiDBLite consensus disorder prediction 12 137 - -
Lal8g0393 675 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Lal8g0393 675 MobiDBLite consensus disorder prediction 208 232 - -
Lal8g0393 675 PRINTS Proline rich extensin signature 2 23 - -
Lal8g0393 675 PRINTS Proline rich extensin signature 23 39 - -
Lal8g0393 675 PRINTS Proline rich extensin signature 42 59 - -
Lal8g0393 675 PRINTS Proline rich extensin signature 61 86 - -
Lal8g0393 675 MobiDBLite consensus disorder prediction 179 274 - -
Lal8g0393 675 Gene3D Phosphorylase Kinase; domain 1 281 377 - -
Lal8g0393 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Lal8g0393 675 Gene3D Transferase(Phosphotransferase) domain 1 378 588 - -
Lal8g0393 675 SUPERFAMILY Protein kinase-like (PK-like) 278 575 IPR011009 -
Lal8g0393 675 MobiDBLite consensus disorder prediction 624 675 - -
Lal8g0393 675 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 45 659 - -
Lal8g0393 675 SMART serkin_6 302 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0393 675 Pfam Protein tyrosine and serine/threonine kinase 307 575 IPR001245 GO:0004672|GO:0006468
Lal8g0393 675 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 45 659 - -
Lal8g0393 675 MobiDBLite consensus disorder prediction 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0393 Lal-Chr8 2643478 2647906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0393 108 658 Trihelix Transcription Factor Family AT1G70460 48.917 1.36e-166 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lal8g0393 PK_Tyr_Ser-Thr 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0393 - - gmx:100781944 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0393 8 2643478 2647906 Lal25g0434 25 2950197 2955717 LSH
Lal8g0393 8 2643478 2647906 Lal10g1011 10 17294780 17299060 LSH