Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0387 ATGGGAGAAAGTGAGGGGAGTGATTGCACTCTCAAGAATATGTTATCATCTGAAGCTGTTGCTTCAGCGGCAGTAACGACGCCGTTGGATGTTCCAGCGAAGAAGCTGGCTAGGCAGCTCGATTTCACAGCCTCTCAATCACAACCGCAGCTGCAGTCTTTGATACCAAAACCGGTTGTTGCGGTGCCGGTGCTTCCGCCAATACTTCATCCTTCCGTTAGGGTTGGGAAACCAGATTCTCCAAAATCAAGATCAAGGCCTAACATCGAAGTGAACGGCACTACTCCAAAGAAGAAAAAGCAGTGCAATTGTAAACACTCTAAATGCTTAAAGCTATATTGTGAATGTTTTGCATCTGGAATATATTGTGATGGTTGCAACTGCGTAAATTGTTTTAACAATGTTGAAAATGAAGCTCCTAGACGAGAAGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCAAAGGTTGTGAGCAGCCCTCATGGAATACATGATAGAAGGTTTATTGTGGGACTCTATGCAAAAGAGGAGGCTGGGGAAGTTTTAATATTAGCAAAGCATAATAAAGGTTGCCATTGCAAGAAATCTGGTTGCCTCAAGAAGTACTGTGAATGCTTCCAAGCCAATGTTCTTTGTTCTGAAAGTTGTAAATGCATTGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTTCATGGAAATCAAAATAAAAATATGGCGCATATTCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGTTCTTCTGGTTATTCATCGCCTCCGGTACCCACAAGCAAAAGAAAAGGTCAGGGACCCTTCGTTGGACCAACAACCAAGGGTCCATCCATTGGCAAGTCAGGGAAACAGGTAAACCATGTCAGAGGTCCAGCACCTTGCTCATCCTTGTCTTCTATCCAAGGAGCTCGTGTTGGAACCACAACATTAGGTCCTTCAAAATTTTCGTACAGGTCGCCTTTAGCAGGCATCATACAACCACATCACCTGAAGGAGCTTTGCTCAGCTCTGGTGCTGGTATCTGGACAAGCTGCGAAGATGCTTACAGACCATAAAATTTCAATGGAAAAGAGTACAGAAGATCAGACAGAAACTTCCCTTGCTTCTTCAACTCAAGATCAGTTACCAAATCAGAAGGATGATGAAGTTGGAAAAGCTTTGGCTGATGATTGTTCGAGTGCAAACCAAACAGATAAAATCAGCCCAGATAATTCTAGTTCAGATGGCAATGATGTCCCAAAAGGGAGGCCGATGTCTCCCGGGACTTTAAGTTTGATGTGTGACGAGCAAGATACAATATCCGTGACAGCTGCTTCCCCTATTTGGTCAATGACTCATGCCTGCAGGACTTCTTCACAATTTCCTTATAGCGAAGGAATGACAGAGGTCTATGCTGAGCAAGAAAGGACTGTATTAACAAAGTTCAGAGATTTTCTCAATGGGGTTATCAATATGGGAGAAATAAACGGCAAGTTAATTGTTTCCTCTTCTTTGGTTATAATTCTACTTTTGGAAACATTCATATTAGTGTTGTTGGAGACAAAGTGTTCTTCATTTGCCATTAGTGAATTAGAGAGTAAAAAAGACCCAATCAACATTAGCACTAGAATCGCCAGTACTGAGATAGTTGATCAGTGTAGATCTGGTTACAATGGTGCTAACAACGCTGTTCCACATGAGGCTGCAACTACAATATCTATCATCCCTGAAACCATGTGTTCTTCATTTGCAATAAGTGAATTAGAGAGTCAAAAGGACCCACTCATAATGGTGAATAGACCCACTCATGATGGTGTTAACAAAGCTATTGTTCCACTTGTGGCCTCAACTTCACCATCTATGTTGGACAACCAGAGGATTAAGCTGAAGTTCAAAATTAAGGATGAGCAGAGATAA 1938 0.4226 MGESEGSDCTLKNMLSSEAVASAAVTTPLDVPAKKLARQLDFTASQSQPQLQSLIPKPVVAVPVLPPILHPSVRVGKPDSPKSRSRPNIEVNGTTPKKKKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVENEAPRREAVEATLERNPNAFRPKVVSSPHGIHDRRFIVGLYAKEEAGEVLILAKHNKGCHCKKSGCLKKYCECFQANVLCSESCKCIDCKNFEGSEERQALFHGNQNKNMAHIQQAANAAITGAIGSSGYSSPPVPTSKRKGQGPFVGPTTKGPSIGKSGKQVNHVRGPAPCSSLSSIQGARVGTTTLGPSKFSYRSPLAGIIQPHHLKELCSALVLVSGQAAKMLTDHKISMEKSTEDQTETSLASSTQDQLPNQKDDEVGKALADDCSSANQTDKISPDNSSSDGNDVPKGRPMSPGTLSLMCDEQDTISVTAASPIWSMTHACRTSSQFPYSEGMTEVYAEQERTVLTKFRDFLNGVINMGEINGKLIVSSSLVIILLLETFILVLLETKCSSFAISELESKKDPINISTRIASTEIVDQCRSGYNGANNAVPHEAATTISIIPETMCSSFAISELESQKDPLIMVNRPTHDGVNKAIVPLVASTSPSMLDNQRIKLKFKIKDEQR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0387 645 PANTHER TESMIN/TSO1-RELATED 52 572 IPR028307 -
Lal8g0387 645 MobiDBLite consensus disorder prediction 365 437 - -
Lal8g0387 645 MobiDBLite consensus disorder prediction 404 426 - -
Lal8g0387 645 MobiDBLite consensus disorder prediction 71 96 - -
Lal8g0387 645 MobiDBLite consensus disorder prediction 374 391 - -
Lal8g0387 645 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 52 572 - -
Lal8g0387 645 ProSiteProfiles CRC domain profile. 98 230 IPR005172 -
Lal8g0387 645 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 99 134 IPR005172 -
Lal8g0387 645 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 193 227 IPR005172 -
Lal8g0387 645 MobiDBLite consensus disorder prediction 266 299 - -
Lal8g0387 645 SMART CXC_2 190 231 IPR033467 -
Lal8g0387 645 SMART CXC_2 97 137 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0387 Lal-Chr8 2601564 2609432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0387 31 502 CPP Transcription Factor Family AT4G29000 53.578 9.46e-168 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lal8g0387 TCR 1.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0387 - - lang:109358342 1088.17