Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal8g0378 | ATGGAACGCATCATCGGCGGCAAGTACAAGCTTGGCCGCAAGATCGGAAGCGGTTCCTTCGGTGAAATCTACCTCGCTACTCATATGGATACATTCGAGATCGTTGCTATCAAGATCGAGAATGGTAAAACAAAGCATCCGCAATTGCTTTATGAGGCCAAGCTCTACAATATTCTTCAAGGAGGAAGTGGCATTCCAAGTATAAAATGGTTTGGTGTAGATGCAGAGGACAATGCGCTTGTTATCGATTTGCTGGGTCCCAGCCTTGAGGATCTTTTTGTCTACTGTGGAAGAAAGTTCTCACTGAAGACAGTGTTGATGTTGGCTGATCAAATGATGAATAGAATAGAATATGTGCACTCAAAAGGATTCCTACACAGAGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCAAACCTGGTTTATATCATTGACTTTGGGCTTGCAAAACGATATCGGGAGTCCACAACCAATCGTCACATCCCTTATAGAGAGAATAAAAACTTAACAGGGACTGCACGTTATGCAAGTTGCAATACTCACCTTGGGATCGAGCAAAGCCGGCGGGATGATTTGGAGTCATTAGGATATGTGCTTTTGTACTTCCTAAGAGGAAGCCTTCCTTGGCAAGGTCTGAAGGCTGCTACAAAAAAGCAAAAGTATGATAAAATATGCGAGAAGAAAGTATCAACTCCTATTGAGGTGTTATGCAAATCTCACCCTGTAGAGTTCACTTCATACTTTCATTACTGTCATTCTCTGACCTTTGATCAGCGGCCTGATTATGGATTCTTGAAGCGCCTATTCCGGGAACTATTTACTCGAGAAGGTTATGAATTTGATTATGTATTTGATTGGACTATCTTAAAGTATCAGCAGTCGCAAAAGAACAGAGTCCAGCCTCACATATCTCCGGTCCTTGGAGCTAGCAACGGTCGTGCAATGCCAATGGATCTTGACAAACATCAAGGAGACGTCTCAGAGCGCATTAAGTCAGGCAATGCTACTGGTTCTGGTGTTAAAATTCAGTTTAAATCACCATCGGGTAAAAATTTGGGTCCTGAAAGTCCTCTTGGCAAGAATATTTTTGGTGAAGCGGGTGTACCCTCTACTTCATTTTCTCTTGCTGGTACCTCAAGAAGGAACCCCTTGAAGCCTGCCTTGTCAACTGAAGCTTCCAACCATTTACATGGGCAAGGAAGTCCCTTCAAGTAG | 1227 | 0.4311 | MERIIGGKYKLGRKIGSGSFGEIYLATHMDTFEIVAIKIENGKTKHPQLLYEAKLYNILQGGSGIPSIKWFGVDAEDNALVIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMMNRIEYVHSKGFLHRDIKPDNFLMGLGRKANLVYIIDFGLAKRYRESTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFTSYFHYCHSLTFDQRPDYGFLKRLFRELFTREGYEFDYVFDWTILKYQQSQKNRVQPHISPVLGASNGRAMPMDLDKHQGDVSERIKSGNATGSGVKIQFKSPSGKNLGPESPLGKNIFGEAGVPSTSFSLAGTSRRNPLKPALSTEASNHLHGQGSPFK | 408 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal8g0378 | 408 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
Lal8g0378 | 408 | Pfam | Protein kinase domain | 9 | 227 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal8g0378 | 408 | MobiDBLite | consensus disorder prediction | 333 | 408 | - | - | |
Lal8g0378 | 408 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
Lal8g0378 | 408 | MobiDBLite | consensus disorder prediction | 371 | 401 | - | - | |
Lal8g0378 | 408 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 326 | - | - | |
Lal8g0378 | 408 | PANTHER | CASEIN KINASE 1-LIKE PROTEIN 3 | 1 | 398 | - | - | |
Lal8g0378 | 408 | ProSiteProfiles | Protein kinase domain profile. | 9 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal8g0378 | 408 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 290 | IPR011009 | - | |
Lal8g0378 | 408 | PANTHER | CASEIN KINASE-RELATED | 1 | 398 | - | - | |
Lal8g0378 | 408 | MobiDBLite | consensus disorder prediction | 333 | 349 | - | - | |
Lal8g0378 | 408 | SMART | serkin_6 | 9 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal8g0378 | Lal-Chr8 | 2532939 | 2539474 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal8g0378 | 9 | 230 | EF-hand Containing Proteins | AT3G20410 | 30.472 | 6.97e-14 | 71.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1 | Lal8g0378 | Pkinase | 1.6e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal8g0378 | K08960 | - | gmx:100805890 | 741.495 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal8g0378 | 8 | 2532939 | 2539474 | Lal10g1022 | 10 | 17381156 | 17387325 | LSH | |
Lal16g1067 | 16 | 7137482 | 7145199 | Lal8g0378 | 8 | 2532939 | 2539474 | PCT | |
Lal8g0378 | 8 | 2532939 | 2539474 | Lal16g1067 | 16 | 7137482 | 7145199 | PCT |