Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0354 ATGGGAAGAGCCTCAAGGTGGTTGAAGAGCTTGTTTGGCATAAAAAGAGGCAAAGAACAACAACACAAAGAAAACTTAGATTCTAGAGTTTTATGTCACAATCCAGCAACTATACCACCCAATCTTTCTCCAGCAGAAGCAGCTTGGTTAAGTTCTTTTTGCAAAGAAACAGATAAGGAGCAGAACAAGCATGCTATTGCTGTGGCCGCAGCCACGGCTGCGGCGGCTGATGCTGCCGTGGCTGCAGCACAGGCTGCAGTGGCAGTGGTTAGGCTGACCAGCATTGGCAAAGGTAGTACTATGTTTGGTGGTGGACATGAGATGTGGGCTGCTCTCAAGATTCAGACACTCTTTAGAGGATTCTTGGCAAGGAAGGCTCTAAGAGCCTTAAAAGGATTGGTGAAGTTACAGGCACTTGTAAGAGGGTTTTTAGTGAGAAAGCAAGCAACAGCAACCTTACATAGTATGCAGGCTCTTATTAGAGCTCAAGCTACAGTCCGGTCACACAAATCTCACAGCTTCATTAACACAAAGAATGAAGCACATAGATTCCAAAACCGAGCACGGAGACTCATGGAGAGATTTGATGATACTAGGAGTGAGTACAAATCTCCAATCCATAGTAGAAGATTATCATCTTCTTTTGATGCCACAATTAACAACAACAACAGTATTGATGGGAGCCCCAAAATTGTGGAAGTGGACACTGGCATTGGGAGGCCTAAATCAAGATCTAGAAGGACCAACACCTCAATTTCAGATTTTGGAGATGACCCTTCATTCCGTGCAGTTTCCTCTCCTCTATCAATCCCATGTGGCACACCAGCTAGATTATCCATACCAAACCACAGGAATTTCAATGACTCACCAGAGTGGGGGTTAACAGGAGAAGAATGCAGGTTCTCTTCTACAGCACACAGCAGCCCAAGGTTCACAAATTCTTGTATTTGTGGTGCACCTATGACACCAAAGAGTGTGTGCACTGATTACTTGTTCCTAAGACAATATGGAAACAATCCAAATTACATGGCTAGCACCCAGTCTTTTAAGGCCAAATTGAGGTCTCACAGTGCTCCAAAGCAAAGGCCAGTACCAGGTCCAAGGAAGAGGCTTTCCTTAAATGAAATGATGGAGTCTAGGAGTAGCTTGAGTGGGGTTAGAATGCAGAGGTCTTGCTCACAGGTTCAAGAAGCAGTTAATTTCAAGAATGCTGTGATGGGTAGGCTTCACAAGTCCACAGAAACTGCTAGGGAGATAGAAAGAAACTACTTCAATAGGAGGAAGCGTTGA 1290 0.4457 MGRASRWLKSLFGIKRGKEQQHKENLDSRVLCHNPATIPPNLSPAEAAWLSSFCKETDKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSIGKGSTMFGGGHEMWAALKIQTLFRGFLARKALRALKGLVKLQALVRGFLVRKQATATLHSMQALIRAQATVRSHKSHSFINTKNEAHRFQNRARRLMERFDDTRSEYKSPIHSRRLSSSFDATINNNNSIDGSPKIVEVDTGIGRPKSRSRRTNTSISDFGDDPSFRAVSSPLSIPCGTPARLSIPNHRNFNDSPEWGLTGEECRFSSTAHSSPRFTNSCICGAPMTPKSVCTDYLFLRQYGNNPNYMASTQSFKAKLRSHSAPKQRPVPGPRKRLSLNEMMESRSSLSGVRMQRSCSQVQEAVNFKNAVMGRLHKSTETAREIERNYFNRRKR 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0354 429 Pfam Protein of unknown function (DUF4005) 314 387 IPR025064 -
Lal8g0354 429 Gene3D - 107 157 - -
Lal8g0354 429 PANTHER IQ-DOMAIN 5-RELATED 1 413 - -
Lal8g0354 429 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
Lal8g0354 429 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 413 - -
Lal8g0354 429 MobiDBLite consensus disorder prediction 228 258 - -
Lal8g0354 429 ProSiteProfiles IQ motif profile. 131 158 IPR000048 GO:0005515
Lal8g0354 429 SMART iq_5 106 128 IPR000048 GO:0005515
Lal8g0354 429 SMART iq_5 129 150 IPR000048 GO:0005515
Lal8g0354 429 Pfam IQ calmodulin-binding motif 109 128 IPR000048 GO:0005515
Lal8g0354 429 Pfam IQ calmodulin-binding motif 134 148 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0354 Lal-Chr8 2379610 2381719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0354 1 388 IQD Protein Family AT3G16490 52.632 5.55e-95 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0354 - - gmx:100797909 556.599