Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0353 ATGGGGAACAAAATAGCGCGAACCACACAAGTTTCTGCATCGGAGTACTACCTACACGAGCTTCCATCAACGTATAATCTGGTTTTGAAAGAGGTTCTGGGACGCGGTCGTTTCTTCAAGTCAATTCAGTGCAAGCACGACGAGGGTTTGGTACTCGTCAAGGTTTATTTCAAGCGCGGCGATTTCATTGATCTATCTGAATATGAACGCCGTCTCTCTCTCATCAAACACATTTTCCAATCCATTGATCACCCTCATCTTTGGCCCTTTCAGTTTTGGCAAGAAACAGACAAAGCAGCGTATCTTTTGAGGCAGTATTTCTTCCATAATCTGCATGATCGATTGAGCACTCGACCTTTTCTCAGTTTTGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTTTAGCTGTGAAACAATGCCACGATAAGGGAGTATGTCATGGTGATATAAAGTGTGAAAACGTGCTGATTACATCCTCAAATTGGCTGTACCTTGCGGACTTTGCATCTTTCAAACCTACATACATTCCATATGATGACCCATCAGATTTCTCTTTTTTCTTTGACACTGGTGGGAGAAGACTCTGTTATCTAGCGCCTGAGAGATTTTATGAACATGGAGGGGAGATGCTGGTTGCGCAAGATTCCCCTTTAAAGCCATCTATGGATATATTTGCTGTTGGGTGTGTAATTGCAGAACTTTTCCATGAGGGGCAGCCATTATTTGAACTGTCTCAACTTCTTGCGTATCGCAGAGGGCAATATGATCCATGCCAGCATCTTGAAAAAATACCAGATCTTGGAATACGTAAAATGATACAACATATGATTCAATTAGAACCAGAGTCTCGATTTTCTGCCGAAACATACCTAAGGGAATATGCTGGTGTTGTTTTTCCGACCTATTTTTCACCTTTTCTGCATGATTTTTACCGATGCTGGAGTCCTCTCCATTCTGATATGAGGGTTTTATTGTGCCAAAGTGCTTTCCAGGAGATACTTAAACAAATGATGAAAGAGAAGTCAACTGATGATGTAAGTGTTACTTCCAGTGAACTTTTGGAAGAGATGGTTAATAAAGATAGTGTGAGTTTCATGAAGGACTCAATGATGAAGAGAGAGGGCATAGGCAAAGGCTTAGTTCATGACCACTATGAACTTCTTGGTGATATTAGTAGCCTTCTGAGGGATGCTAAAAAAAGTAATGTTCCAACTGGTCCCCAACATGCAACAGGAAATTCACACAATTCTACATTTCCTGAAAATCTAAACTATTTGCAATCTCCTGATGAGCTGCTTCAAACTATCTCCAATGCATTTCGAGGAAATGACCACCCGTTTCTGAAAAATATTACTTTGAATGATCTGAATTCGTTCATGTCTGAGTATGATAGTCAATCAGATACATTTGGAATGCCTTTTCTCCCATTACCAAAGGATAGTATGAGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTCTGCTCCTGCATACGCAACGTCAAGTTGCCTCACCTGCGGAGGGCAGCTATACTCTTGTTGAAGGCTTCTGCCCTATATATTGATGATGAAGATCGTTTGCAGCGTGTTATCCCATATGTGATTGCAATGCTTTTGGATCCAGCAGCAATTGTGCGCTGTGCTGCTTTGGAGACTTTGTGTGACATTCTGCCCTTGGTGCGAGATTTTCCTCCCAGTGACGCAAAGATATTTCCTGAGTATATTTTCCCAATGCTCTCTATGCTTCCTGACGATCCAGAGGAAAGTGTGAGGATATGCTATGCCAGCAATATACCTAAGCTGTCACTAACTGCATATGGATTCTTGATACACTCGATAAGCTTGAGTGAGGCAGGTGTCCTTGATGAATTGAGTTTGCCAAAGAAGCCATTGGTATCATGCAGTCAGTCCTCTGGACGAATGAAGAGGATAAATAGTGATGTCCAACTTGTACAGCTGAGGAAATCCATTGCAGAGGTTGTCCAAGAACTTGTTATGGGTCCAAAGCAAACACCGAATATTAGGAGAGCACTTCTTCAAGGTATTGGTAAATTGTGCTTCTTCTTTGGCGTGAGACAGAGTAATGACTCTCTCTTACCCATCCTGCCTGCTTTCTTAAATGATCGGGATGAGCAGTTAAGAACAGTATTCTATGAAAAGATTGTTTATGTCTGCTTTTTTGTGGGCCAAAGAAGTGTAGAAGAATATCTATTACCTTACATTGAGCAGGCTTTAAGTGACACAACCGAAGCTGTCATTGTTAAAGCCTTTGAGTGTTTGGCTATTCTATGCAAAAGCAGGTTCTTCCGAAAGAGGATACTGCTTCAATTGATAGAGAGTGCCTTTCCTTTATTGTGTTATCCTAGTGAATGGGTACGAAGATCAGCTGTCTCTTTCATTGCTGCTACCAGTGAGAGCTTGGATGCAGTAGATTCTTATGTTTTCCTTGCCCCTGTTATACGACCTTTCCTCCGTAGACAACCTGTGTCTCTTGCTTCAGAGAGGGCTCTTTTGTCATGCTTAAAACCTCCTGTCTCAAGACAGGTTTTCTATGAAGTCTTTGGGAACCCCAAAAGTTCAGACATGTTAGAAAGACAGAGAAAGATATGGTATAGTTCTTCACAATCTAAACTGTGGGAAATGGATTTATTGAAAAAAGGAATTGAGGAGTTGGACTCATTAAAGAACTGGACTGACAAGCAACAAGGTCCCGGGGTTCAACAAGCTGTTGGCACTGCCTCTCAACAGTCAGGGCTAACTGATAGTGACAAAGCCGAGGCAAAATTGAGAGGTATGGGGGCATTTATGCATAATGATAGCAGTATGGCAGGACATCGTGATCCCCAAAGCTCGGAAAAGCTACAGTTTTCAGGATTCATGTCACCACATTTTTGTGGTGTAAACAGTTTGACATATGAAAAGCCATCAGAAGGCATACCTTTGTACTCCTTCAGTTCAGACAGGCGGGGAATGGGAGTCCCTCCAGCAGCATCTGATTATCCACTACAAATGAATTCTCTGAGTGTCAATTCATCTTCCATGCCTTGGGTTAATCCACTCAGCAAATCCTTTAATTTGGCTAGTTCAGTTCCATCTCCAAAGCTTTTTTCAGGTTCTTTCAGCATCAACAATGGTTCTAAACAGTTCCATCGGGTGGTACATGAACCAGATGGCAAGGAAAAGGAGACAGCCTATGTTAATAGCACATTTCAAGATGTGGGATTATCTGCTAACATTAAAGGCACTTCAATCACAATGGAAGATGCAACTGCCCAAACTGATCTATCAGAATTAGCTTCTTTTGCTCGAACATCCATTCCTGATTCGGGTTGGAGGCCCCGTGGGGTGTTGGTTGCGCACCTCCAGGAGCACCGTTCAGCTGTCAATGACATAGCAGTTTCTGCTGATCATAGCTTCTTCATGAGTGCATCTGACGACTCTACACTTAAGATTTGGGACTCGAGAAAGCTGGAAAAGGACATTTCATTCAGGTCAAGGCTAACTTATCATCTGGAGGGAAGCCGTGCATTATGTGCAGCAATGCTTCCAGGTCCTGCGCAGGTACTAGTTGGAGCATCTGATGGATTCATTCACATGTTTTCTGTTGATCATATTTCTAGAGGGCTAGGAAATGTTGTTGAGAAGTATTCTGGTATTGCTAATATCACAAAAAAGGACGTCAAGGAAGGTGCCATACTCAGCCTTTTGAATTGCCCCATGGATAATTATACCATCATGTATAGCACCCGGAACTGTGGCATTCATCTATGGGATACTAGGTCAAATTCTGATTCCTGGACCCTAAAAGCTACTCCTGAGGAGGGCTATGCATCTTCTCTTGTATCTGGGCATTGTGGTAATTGGTTTGTCACAGGGTCTTCCAGGGGTGTTATTACACTTTGGGACATGAGGTTTCTTATACCTGTGAACTCATGGCAGTATTCTCTTGCTTGCCCAATAGAAAAGATGTGTCTCTTTCTTTTTCCTGCAAATGCTTCTCTCTCTTCAACTGCCAGGCCCCTTGTTTATGTAGCTGCTGGTTGTAATGAAGTTTCTCTCTGGAATGCAGAGAATGGTAGCTGTCACCAGGTGCTAAGGGTGGCCAATTATGACAGTGATGCAGAAATATCTGATTTGCCTTGGGCCTTGGCCAGGCCTTCAAGTAAGCCGACTTCCGCATCAGATTTTAGACGAAATGTTAATCGCAAGTATGGAGTTGATGAGATAAATGAACCTCCTTCCCGTATTCCTGGTATTCGTTCATTACTTCCCTTGCCAGGGGGCGATCTATTGACTGGGGGCACTGATTTAAAGATACGTCGATGGGATCATTCCAGTCCCGACAGAAGTTACTGTATTTGTGGACCAAACTTAAAAGGAGTAGGAAATAATGATTTTTACGAATCAAAATCTAGCTTTGGAGTGCAAGTTGTACAGGAGACTAAAAGACGTCCTCTCACAGCCAAGCTGACAGGGAAGGCAATGCTTGCAGCCGCCGCCACTGATTCTGCTGGCTGCCATCGCGATTCTATTGTTTCTTTGGCTTCTGTTAAGTTAAACCAGAGACTCTTACTATCCAGTGGTAGGGATGGGGCCATCAAGGTTTGGAAGTAA 4614 0.4274 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDFIDLSEYERRLSLIKHIFQSIDHPHLWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFVEKKWLAFQLLLAVKQCHDKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMLVAQDSPLKPSMDIFAVGCVIAELFHEGQPLFELSQLLAYRRGQYDPCQHLEKIPDLGIRKMIQHMIQLEPESRFSAETYLREYAGVVFPTYFSPFLHDFYRCWSPLHSDMRVLLCQSAFQEILKQMMKEKSTDDVSVTSSELLEEMVNKDSVSFMKDSMMKREGIGKGLVHDHYELLGDISSLLRDAKKSNVPTGPQHATGNSHNSTFPENLNYLQSPDELLQTISNAFRGNDHPFLKNITLNDLNSFMSEYDSQSDTFGMPFLPLPKDSMRCEGMVLITSLLCSCIRNVKLPHLRRAAILLLKASALYIDDEDRLQRVIPYVIAMLLDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYIFPMLSMLPDDPEESVRICYASNIPKLSLTAYGFLIHSISLSEAGVLDELSLPKKPLVSCSQSSGRMKRINSDVQLVQLRKSIAEVVQELVMGPKQTPNIRRALLQGIGKLCFFFGVRQSNDSLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDTTEAVIVKAFECLAILCKSRFFRKRILLQLIESAFPLLCYPSEWVRRSAVSFIAATSESLDAVDSYVFLAPVIRPFLRRQPVSLASERALLSCLKPPVSRQVFYEVFGNPKSSDMLERQRKIWYSSSQSKLWEMDLLKKGIEELDSLKNWTDKQQGPGVQQAVGTASQQSGLTDSDKAEAKLRGMGAFMHNDSSMAGHRDPQSSEKLQFSGFMSPHFCGVNSLTYEKPSEGIPLYSFSSDRRGMGVPPAASDYPLQMNSLSVNSSSMPWVNPLSKSFNLASSVPSPKLFSGSFSINNGSKQFHRVVHEPDGKEKETAYVNSTFQDVGLSANIKGTSITMEDATAQTDLSELASFARTSIPDSGWRPRGVLVAHLQEHRSAVNDIAVSADHSFFMSASDDSTLKIWDSRKLEKDISFRSRLTYHLEGSRALCAAMLPGPAQVLVGASDGFIHMFSVDHISRGLGNVVEKYSGIANITKKDVKEGAILSLLNCPMDNYTIMYSTRNCGIHLWDTRSNSDSWTLKATPEEGYASSLVSGHCGNWFVTGSSRGVITLWDMRFLIPVNSWQYSLACPIEKMCLFLFPANASLSSTARPLVYVAAGCNEVSLWNAENGSCHQVLRVANYDSDAEISDLPWALARPSSKPTSASDFRRNVNRKYGVDEINEPPSRIPGIRSLLPLPGGDLLTGGTDLKIRRWDHSSPDRSYCICGPNLKGVGNNDFYESKSSFGVQVVQETKRRPLTAKLTGKAMLAAAATDSAGCHRDSIVSLASVKLNQRLLLSSGRDGAIKVWK 1537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0353 1537 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1537 IPR045162 GO:0004674|GO:0016236|GO:0045324
Lal8g0353 1537 ProSiteProfiles HEAT repeat profile. 698 736 IPR021133 -
Lal8g0353 1537 SMART WD40_4 1114 1153 IPR001680 GO:0005515
Lal8g0353 1537 SMART WD40_4 1409 1443 IPR001680 GO:0005515
Lal8g0353 1537 SMART WD40_4 1497 1537 IPR001680 GO:0005515
Lal8g0353 1537 SMART WD40_4 1261 1302 IPR001680 GO:0005515
Lal8g0353 1537 SMART WD40_4 1164 1201 IPR001680 GO:0005515
Lal8g0353 1537 CDD STKc_Vps15 16 303 - -
Lal8g0353 1537 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1504 1537 - -
Lal8g0353 1537 ProSiteProfiles Trp-Asp (WD) repeats profile. 1121 1153 IPR001680 GO:0005515
Lal8g0353 1537 Pfam WD domain, G-beta repeat 1117 1153 IPR001680 GO:0005515
Lal8g0353 1537 Gene3D - 617 841 IPR011989 -
Lal8g0353 1537 SUPERFAMILY ARM repeat 420 825 IPR016024 -
Lal8g0353 1537 Gene3D - 1076 1205 IPR015943 GO:0005515
Lal8g0353 1537 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0353 1537 Gene3D Transferase(Phosphotransferase) domain 1 21 375 - -
Lal8g0353 1537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Lal8g0353 1537 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1121 1153 - -
Lal8g0353 1537 SUPERFAMILY Protein kinase-like (PK-like) 26 321 IPR011009 -
Lal8g0353 1537 Gene3D - 1224 1537 IPR015943 GO:0005515
Lal8g0353 1537 SMART serkin_6 27 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0353 1537 Gene3D - 474 616 IPR011989 -
Lal8g0353 1537 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0353 1537 ProSiteProfiles Trp-Asp (WD) repeats profile. 1504 1537 IPR001680 GO:0005515
Lal8g0353 1537 SUPERFAMILY WD40 repeat-like 1115 1537 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0353 Lal-Chr8 2368147 2377166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0353 2 252 AGC Kinase Gene Family AT3G10540 22.519 2.04e-12 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Lal8g0353 Pkinase 8.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0353 K08333 - gmx:100818467 2734.52