Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0348 ATGGGAGAAGAAGCGAAGATAACTGACTCCGAGAGGGTCACGGAGTGGGAGATTGGTCTCCCCACCGGCGACGACATCACACCACTCTCTCACCCGCTTATTCCGACGGAACTTGCTTCCGCCTTCAGCATCTCGCCGGAGACCTACCGGACACTTCTCGACGTCAATCGCGCCTCCAACGACACCATCTCTGCCATCCTAGGTGGCAGCGGAGGTTCCCAGGCCTTGTCCATGGTCGTTGAACCCGACGAAGAAGAAGAGGAAGAACCTGATCGAGAAAACGGGTCGGGTACTGAATCTAGAAAACTACGTAGACTCGATTCCGCCGAGGATGCGGATTCGGTTATGCTAAACAACGATGATTCATCGGCTCGAGCGCTGAAACGGCCTCGTTTAGTGTGGACCCCGCAATTGCATAAACGATTCGTGGATGTTGTGGCGCACCTAGGGATCCAAAACGCGGTTCCGAAGACGATTATGCAGTTGATGAACGTTGACGGTATGACACGCGAAAACGTAGCGAGTCACCTTCAGAAATACCGACTTTACCTGAAGAGAATGCAAGGGTTTTCAGACAATGCTCCTTCTTCTACGGATCAGCTTTTCGCTTCCACGCCGGTGCCTCAGAGATTGCAAGATTCCAGCGCCGGTGGTTGTGGTGGTGGAAGTGCTGGTCATTCTTCTCATGCACCGATTCCGATGCCTTATCCGCCGCCGCCGCATATGATGGCGATGCTTGGGATGCCTCATCATGTATTCAATAACGGTGGCTTTCAGCAAAGGGATTGGTCTTCGGGTTTTTCTTACCCTCATGGTCTTACTCCTAGTGGTGATAAATGA 840 0.5262 MGEEAKITDSERVTEWEIGLPTGDDITPLSHPLIPTELASAFSISPETYRTLLDVNRASNDTISAILGGSGGSQALSMVVEPDEEEEEEPDRENGSGTESRKLRRLDSAEDADSVMLNNDDSSARALKRPRLVWTPQLHKRFVDVVAHLGIQNAVPKTIMQLMNVDGMTRENVASHLQKYRLYLKRMQGFSDNAPSSTDQLFASTPVPQRLQDSSAGGCGGGSAGHSSHAPIPMPYPPPPHMMAMLGMPHHVFNNGGFQQRDWSSGFSYPHGLTPSGDK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0348 279 MobiDBLite consensus disorder prediction 94 111 - -
Lal8g0348 279 SUPERFAMILY Homeodomain-like 127 186 IPR009057 -
Lal8g0348 279 MobiDBLite consensus disorder prediction 81 117 - -
Lal8g0348 279 MobiDBLite consensus disorder prediction 207 234 - -
Lal8g0348 279 Gene3D - 126 188 - -
Lal8g0348 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 134 185 IPR017930 -
Lal8g0348 279 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 268 IPR044841 GO:0003700|GO:0006355
Lal8g0348 279 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 268 - -
Lal8g0348 279 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 130 182 IPR006447 GO:0003677
Lal8g0348 279 Pfam Myb-like DNA-binding domain 133 181 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0348 Lal-Chr8 2349380 2350219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0348 1 260 G2-like Transcription Factor Family AT3G46640 48.973 9.10e-78 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal8g0348 Myb_DNA-binding 3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0348 - - aprc:113858844 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0348 8 2349380 2350219 Lal8g0348 8 2349380 2350219 ECH