Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0338 ATGGAGTGCTCAGTTGAAGGTCTAGAGAAAGATCTAAATAACATGAGGAAGTGTTACAGTAGTGGAAGAACAAAGGAAGCATCATGGAGGGAATCACAACTCAAAGGGTTACGTAACTTCATCATAGAACAAGAGGAACAAATCTCAAAGGCCCTTAAGCAAGATTTAGGGAAGCATCAAGTTGAGGCTTTTAGAGATGAGGTGGGAATATTAATGAAGTCCATAAATATTGCAATAAAATCCTTAAGAAAATGGATGGCAGGCCAAGAGGCTAAACTGCCACAAATAGCACTGCTTTCCAGTGCAGAAATTGTTCCTGAGCCTCTTGGTCTAGTTCTCATAATATCATCATGGAATTTCCCTTTTGGACTTTCCTTAGAGCCACTAGTAGGAGCTGTAGCTGCTGGAAATGCTGTGGTTCTGAAGCCTTCTGAGTTGTCCCCTTCTTGTTCTTCTCTTCTAACTTCTGTCTTACCAACTTACTTGGACAATAATGGCATCAAAGTCATCCAAGGTGGTCCTATGGTAGGTCAACAACTCCTACATCAAAGATGGGACAAGATTTTCTTCACAGGAAGTGCAAGGGTAGGGCGTATGGTTATGTCTGCAGCAGTGGAGAATCTGACTCCTGTGACTTTGGAGTTAGGTGGAAAATGCCCAGCACTCGTTGATTCTCTTTCAGCTTCTTTGGACAAAAAGGTGGCTGTGAAAAGAATTTTGGTGGCAAAATATGGGGCTTGTGCAGGACAAGCATGCATAGCAATTGATTATATCCTAGTACAGAAGAGTTTCAGTTCTGAATTGGTGGCATTAATGAAGATCTGGATTAAGGAAATGTTTGGAGATAACCCAAAAGCATCAAACACTATAGCAAGGATAGTTAACGAAAAACATTTTTCTAGACTCAAGAGTCTTCTTACTGATCCTAAGGTCAAAGAATCAGTGATTTATGGTGGTTCAATGGACATAGATAACCTATTCATCGAACCAACAATACTACTGGATCCACCACTTGATTCAGTAATAATGACAGAAGAAATCTTTGGCCCTCTACTTCCAATTATTACCGTGGAGAAGATTGAAGACAGTATTGAATTTATAAACTCAAGGCCTAAACCTCTAGCAATTTATGCTTTTACTAAAAACAAAACATTGCAGAGAAGAATGGTATCTGAAACATCATCTGGAAGTGTTGTATTCAATGATGCAATTATACAATATATAGCGGATACCCTTCCATTTGGAGGAGTTGGTGAAAGTGGATTTGGCAAGTACCACGGGAAGTTCTCATTTGACAACTTCAGCAATCACAAGGCAGTGGCCAGAAGAAGTTTCTACACTGATTTTTGGTTCAGGTTTCCTCCATGGACTCTTAACAAGGTCCAACTACTTGAGGCTGGTTACAATTTAGACTATCTTGGAATTGTCCTTATCATTCTTGGCTTGAAGAAATCTACACGCAAATTTGATTGCCCTTTAAATTAA 1485 0.396 MECSVEGLEKDLNNMRKCYSSGRTKEASWRESQLKGLRNFIIEQEEQISKALKQDLGKHQVEAFRDEVGILMKSINIAIKSLRKWMAGQEAKLPQIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLVGAVAAGNAVVLKPSELSPSCSSLLTSVLPTYLDNNGIKVIQGGPMVGQQLLHQRWDKIFFTGSARVGRMVMSAAVENLTPVTLELGGKCPALVDSLSASLDKKVAVKRILVAKYGACAGQACIAIDYILVQKSFSSELVALMKIWIKEMFGDNPKASNTIARIVNEKHFSRLKSLLTDPKVKESVIYGGSMDIDNLFIEPTILLDPPLDSVIMTEEIFGPLLPIITVEKIEDSIEFINSRPKPLAIYAFTKNKTLQRRMVSETSSGSVVFNDAIIQYIADTLPFGGVGESGFGKYHGKFSFDNFSNHKAVARRSFYTDFWFRFPPWTLNKVQLLEAGYNLDYLGIVLIILGLKKSTRKFDCPLN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0338 494 PANTHER ALDEHYDE DEHYDROGENASE 7 488 IPR012394 GO:0006081
Lal8g0338 494 SUPERFAMILY ALDH-like 13 457 IPR016161 GO:0016491
Lal8g0338 494 PIRSF ALDH 2 474 IPR012394 GO:0006081
Lal8g0338 494 Coils Coil 42 62 - -
Lal8g0338 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Lal8g0338 494 Pfam Aldehyde dehydrogenase family 10 440 IPR015590 GO:0016491
Lal8g0338 494 PANTHER ALDEHYDE DEHYDROGENASE 7 488 - -
Lal8g0338 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0338 Lal-Chr8 2281863 2284917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0338 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 52.893 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0338 K00128 - gmx:100819197 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0338 8 2281863 2284917 Lal8g0338 8 2281863 2284917 ECH
Lal8g0338 8 2281863 2284917 Lal2g0198 2 1177902 1181050 PCT
Lal2g0198 2 1177902 1181050 Lal8g0338 8 2281863 2284917 PCT