Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0310 ATGAACCCATGGGGTTTTGTGTTTAAACTTGTGGTTTTATCATATTTATGCTCTTCAGTATCAAGTCTTGGTTCCATGTCTCCAATGGCTACCTCTTATGGTGACCAAGGTTCTGTCATTTGTGTCTTGAAATCGGACGGGTCTCATACTGTGAACTGTTATGGAAAAAACTCGGCCATAATTTATGGAACACAACCTCATTTACAATTCCTTGGCCTAACTGCTGGTGATGGCTTTGTCTGTGGGCTTCTGCTGAGTTCTAGTCAGCCCTATTGTTGGGGTAGCAGTAGCCACATTCAGATGGGCGTGCCTCAACCTATGATCAAAGGAGCTGAGTACCTAGAAATCAGTGCTGGTGATTACCATGTTTGTGGATTGAGGAAACCCTTGAAGGGAAGGCACAGGAACACTTCTTTTGTTGATTGTTGGGGCTACAAGATGACCAAAAACTATGTGTTTGATGGACAGATTCAATCAATTTCATCTGGCTCCGAATTCAATTGTGGCTTGTTTTCACAGAATAGGACTATGTTCTGCTGGAGTGATGAGCCAGATAACAAGGATATTATTAGTAAGATTCCTAAAGACAAAAGATTCCAGAAGATTGCTTGTGGTGGATTGCATGTATGTGGGATCTTAGAAGGGATGAATGCTAAAACTCTTTGTTGGGGAAGGGACTTAAATATGGAGGAAGAAATTTCATTGGTACATTCAGGACAAGGACAAGGTGATATTGGTTTGGTTCCAACCGTTCCCATGCTTTCTGTAGTTGGAGGAAAGTTTCATGCTTGTGGTATTAAGAGCTATGATCATGGAGTGATTTGTTGGGGCTGTAGTTTGAGAGGAAGCACTCCACCTCCTAGTGAGATTAAGGTATTTGAGATTGCTGCTGGGAATTATTTCACATGTGGAATAATTGCTGAGAAATCTCTTCAACCAGTTTGTTGGGGAACAAATTTCCCTACCTCTCTTCCAATTGCTGCATCACCAAGAATGTGTAGGTCCACTCCCTGTCCTCCAGATTACTATGAAGTGGATCAGAAAAAGGGTCTTTGCAAGTCACCATATTCTCATCTTTGCATGCCTTGCAGCAGTGATTGTCCTTCTGAAATGTATCTGAAAAGTAAATGCAATGTGACATCTGATAGAGTATGCGGATATAATTGTACTACTTGTTCGTCACAAGAATGCTTCTCCAATTGTTCAGTTATATATGCAAAACCTGTTCCTGATGCTTATTTGAAGAAAAAAAAAGAGAAGATTTGGTCTCAGCAGTTGCCAGTCATTATTGCTGAGATAGCTTTTGTAGTTTTCATAGTTTGTGTTGTATCTATTTCTGCAGTTTTGTATGTTAGATACAGGCTAAGAAATTGCAAGTGTTCAGCAACAAGGTCAAAGGTGAAGAATCCTTCACTTCAGAATGAGAACACGAAGATAAAGCCAGACATGGAGGAATTCAAGATTAGGAGGGCACAGAAGTTCACATATGAGGAACTTGAAAGGGCGACTGATGGATTCAAAGAAGAATCCATAGTTGGGAAGGGGAGTTTCTCTTGTGTGTTCAAGGGAGTTTTGAAAGATGGCACTGTTGTTGCTGTTAAAAGGGCCATAATGTCTCCTTCTCCCAACATGCAGAAGAACTCCAAAGAGTTTCACAATGAACTTGACTTACTCTCAAGGCTGAACCATGCACACTTGCTCAACCTACTAGGCTATTGTGAAGAAGGTGGAGAAAGGCTTCTTGTTTATGAGTTCATGGCTCATGGATCTTTATATCAACACCTACATGGCAAAAACAAGGTGCAATTGGATTGGATCAGGAGGGTGACAATTGCAGTCCAAGCGGCTCGAGGAATCGAATACTTGCATGGCTATGCATGTCCACCAGTGATTCATAGAGATATAAAATCCTCAAACATCCTCATTGACGAAGAACACGATGCTAGAGTTGCTGATTTTGGTTTATCATTACTTGGTCCTACAGATAGTAGCTCTCCACTAGCAGAACTACCAGCTGGTACTCTTGGTTATCTTGATCCTGAATACTATAGGCTTCATTACCTCACCACAAAATCTGATGTATACAGCTTTGGTGTTCTACTATTGGAGATTCTAAGTGGTAGAAAAGCCATTGACATGCAATATGATGTAGGGAATATAGTTGAATGGGCAGTGCCTTTGATCAAGTCAGGAGATATAACTGCAATCTTGGATCCAGTTCTTAAACCTCCTCCTGATCTTGAAGCCTTGAAAAGGATTGCTAATGTGGCTTGTAAAAGTGTGAGAATGAGAGGGAAAGATAGGCCTTCAATGGACAAAGTAACAACAGCTTTGGAGAGAGGACTTGCACAGTTAATGGGTAGCCCTTACATTGATCAACCAATTTTGCCAACTGAGGTGGTTTTAGGAAGTAACAGGATGCACAAAAAAACATCTCAAAGGTCTTCAAACAGGTCAGCTAATTCAGAAATTGATGTGCCAGAAACTGAGGATCAGAGATTTGAGTTTAGAGCACCCTCATGGATAACTTTTCCAAGTGTTACTTCATCTCAAAGGAGAAAGTCATCAGGCTCAGAAGCTGAAGTTGATGGCAAAAATAATACTGCAGCAGAAGGGAGGAACATAGGATCAAATGTTGGAGTTGGAGTTGGTGGTGATGTTTTGAGAAGCCTTGAGGAAGAAGAGATAGGTCCTGCTTCTCCTAGAGAGAGGTTGTTCTTGCAGCACAACTTCTAA 2736 0.4115 MNPWGFVFKLVVLSYLCSSVSSLGSMSPMATSYGDQGSVICVLKSDGSHTVNCYGKNSAIIYGTQPHLQFLGLTAGDGFVCGLLLSSSQPYCWGSSSHIQMGVPQPMIKGAEYLEISAGDYHVCGLRKPLKGRHRNTSFVDCWGYKMTKNYVFDGQIQSISSGSEFNCGLFSQNRTMFCWSDEPDNKDIISKIPKDKRFQKIACGGLHVCGILEGMNAKTLCWGRDLNMEEEISLVHSGQGQGDIGLVPTVPMLSVVGGKFHACGIKSYDHGVICWGCSLRGSTPPPSEIKVFEIAAGNYFTCGIIAEKSLQPVCWGTNFPTSLPIAASPRMCRSTPCPPDYYEVDQKKGLCKSPYSHLCMPCSSDCPSEMYLKSKCNVTSDRVCGYNCTTCSSQECFSNCSVIYAKPVPDAYLKKKKEKIWSQQLPVIIAEIAFVVFIVCVVSISAVLYVRYRLRNCKCSATRSKVKNPSLQNENTKIKPDMEEFKIRRAQKFTYEELERATDGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPSPNMQKNSKEFHNELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLYQHLHGKNKVQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHDARVADFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYDVGNIVEWAVPLIKSGDITAILDPVLKPPPDLEALKRIANVACKSVRMRGKDRPSMDKVTTALERGLAQLMGSPYIDQPILPTEVVLGSNRMHKKTSQRSSNRSANSEIDVPETEDQRFEFRAPSWITFPSVTSSQRRKSSGSEAEVDGKNNTAAEGRNIGSNVGVGVGGDVLRSLEEEEIGPASPRERLFLQHNF 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0310 911 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Lal8g0310 911 PANTHER RECEPTOR-LIKE KINASE 5 911 - -
Lal8g0310 911 SUPERFAMILY RCC1/BLIP-II 38 283 IPR009091 -
Lal8g0310 911 MobiDBLite consensus disorder prediction 847 883 - -
Lal8g0310 911 Gene3D Transferase(Phosphotransferase) domain 1 586 786 - -
Lal8g0310 911 MobiDBLite consensus disorder prediction 804 831 - -
Lal8g0310 911 Gene3D Phosphorylase Kinase; domain 1 476 585 - -
Lal8g0310 911 MobiDBLite consensus disorder prediction 805 823 - -
Lal8g0310 911 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 337 385 IPR001368 GO:0005515
Lal8g0310 911 SUPERFAMILY Protein kinase-like (PK-like) 486 778 IPR011009 -
Lal8g0310 911 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 88 129 IPR000408 -
Lal8g0310 911 Pfam Protein tyrosine and serine/threonine kinase 509 776 IPR001245 GO:0004672|GO:0006468
Lal8g0310 911 ProSiteProfiles Protein kinase domain profile. 506 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0310 911 SMART serkin_6 506 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0310 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Lal8g0310 911 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 5 911 - -
Lal8g0310 911 Gene3D - 29 188 IPR009091 -
Lal8g0310 911 Gene3D - 189 341 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0310 Lal-Chr8 2075659 2078394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0310 4 911 Receptor kinase-like Gene Family AT3G59420 65.326 0.0 1177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lal8g0310 PK_Tyr_Ser-Thr 8.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0310 - - gmx:100797455 1390.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0310 8 2075659 2078394 Lal8g0310 8 2075659 2078394 ECH
Lal25g0370 25 2492191 2494968 Lal8g0310 8 2075659 2078394 LSH