Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0309 ATGCCAAGAATAATGGCTACAAAATTATTCTTCCTTCTCTATTTCACCTCAACTATAATCCTATGCCTCATGGCATCACAAATCAACTCATCAACACTTGAAACTGATACACATGCCCTTGTTGAAATAAAACGTGCCATTGATCCAAACTCAGTGTCTCCCTCATCCTATCTTAATAGTTGGGATTTCACAATGGATCCATGTGAAAGCACAGGTTCACAATTCCTTGGAATATTGTGCAACTTGCCTCTAGATAACTCTTCTAGTAGAGTTGTTGCACTTGATCTTGATAGCATTGGATATGATGGTTTCTTAGCACCAGCTATAGGGAACCTCACAGAACTAACAGTGCTTAACCTTGACAAGAACAACTTTAGAGGTCCAATACCACAAACCATTTCCAACCTAAGGAAATTAATCAGACTCACCCTATCAGAAAATTTCTTCACTGGTCCTATTCCATTAGGAATAAGTGCACTAAAAAACCTTCAACATCTTGATGTTTCTTTCAACAGGCTCTCAGGTTCAATACCAACAAATATTAGTGGTTTGAGAAGCTTAACATATATGAGTTTATCAAACAATGCATTTGCAGGTGGAGTCCCTGATTTAAAAGGACTATGGCAGCTACAAACAATAGACCTTAGTATTAACCAGTTTTATGGTGACATACCAAACCTTCCAATAAGTTTGAGAAAAATATATTTCAACCATAACATATTCTCAGGTCACATGACACCACTCAAGGGTCTCAAAATGCTGAAATGGCTAGACATAAGTGATAACAGGCTTTCAGGTGCCATAAGCAAGGACATTATATCCTTAAAAGGGATTGTTCACCTCAATGTTTCTTACAACAGGTTTACTGCATTAGAGGTCATTAACTACTCATTAGAAGGGCCAATGCTTCAAGTGCTTGAGGCTCAAGGTAACCATTTGAGGGGTCATTTGCCACTGAATTTAGTGACACTTAAGAACTTGACTAATGTTAACTTGGCTAATAATCAATTCTATGGTATCATTCCAAATGAATATGGAACAAAAGTTATGACATCATGGAGAAAGTTGTATTTGGAATATAACTTTCTTACAGGGAATCTTCCACCTGAATTTGCTCTACAAACAAATATTAGAGTGGAGTTTGGGATCGATGACTCCATTAATGATGAGGCAGTAGGAAATGCTACTATGGCAGAGTTTAGTAGTAGCATAGCGGACGAAAACAAAACGGATAAGAGTTCTTTCGATTTAGCTTATAAACAAGATCTAGATGAAAATGTAACTCAAGGTTCTTCTGGAGGGGACACAATTCCATCTGCAATTCCAGCAGTATCAATTGTTTCAGCTGATGAACCTTATGTGGGTCAGGAGTTTGACTCGGAAACGGCAGCACATGCATTCTATAATGCATATGCCACGAGTGTTGGATTTATCATACGTGTAAGTAAACTTTCACGATCAAGGCGTGATGGAACTGCTATTGGAAGGTCTCTTGTTTGCAACAAAGAAGGTTACAGAATGCCTGACAAGCGTGAAAAGATTGTAAGACAAAGGGCAGAGACAAGGGTTGGTTGTAGGGCAATGATTATGGTAAGGAAAGTAAGTTCCAGTAAGTGGGTTGTTACAAAGTTTGTAAAGGAGCATACACATCCTCTGGCTCTGTCACCTGTAAAAGGTAGAAGGGGATTCATTTATGAGCAATATCCCAACGAGCATGATAAAATTCGAGAACTATCTCAGCAGTTGGCTTCAGAGAAGAGGAGATCTGCAACCTATAAAAGGCATCTTGAACTGTTATTTGAGCACATTGAGGAGCATAATGATAGCCTTTCAAAGAGAATACAACACATAGTTGACAGTGTGAAGGAGATGGAGACCAAAGAACAAGAGAGTCATAGATAG 1902 0.3854 MPRIMATKLFFLLYFTSTIILCLMASQINSSTLETDTHALVEIKRAIDPNSVSPSSYLNSWDFTMDPCESTGSQFLGILCNLPLDNSSSRVVALDLDSIGYDGFLAPAIGNLTELTVLNLDKNNFRGPIPQTISNLRKLIRLTLSENFFTGPIPLGISALKNLQHLDVSFNRLSGSIPTNISGLRSLTYMSLSNNAFAGGVPDLKGLWQLQTIDLSINQFYGDIPNLPISLRKIYFNHNIFSGHMTPLKGLKMLKWLDISDNRLSGAISKDIISLKGIVHLNVSYNRFTALEVINYSLEGPMLQVLEAQGNHLRGHLPLNLVTLKNLTNVNLANNQFYGIIPNEYGTKVMTSWRKLYLEYNFLTGNLPPEFALQTNIRVEFGIDDSINDEAVGNATMAEFSSSIADENKTDKSSFDLAYKQDLDENVTQGSSGGDTIPSAIPAVSIVSADEPYVGQEFDSETAAHAFYNAYATSVGFIIRVSKLSRSRRDGTAIGRSLVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMVRKVSSSKWVVTKFVKEHTHPLALSPVKGRRGFIYEQYPNEHDKIRELSQQLASEKRRSATYKRHLELLFEHIEEHNDSLSKRIQHIVDSVKEMETKEQESHR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0309 633 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 5 375 - -
Lal8g0309 633 SUPERFAMILY L domain-like 75 376 - -
Lal8g0309 633 Pfam Leucine rich repeat N-terminal domain 34 81 IPR013210 -
Lal8g0309 633 Gene3D Ribonuclease Inhibitor 33 203 IPR032675 -
Lal8g0309 633 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Lal8g0309 633 Gene3D Ribonuclease Inhibitor 204 295 IPR032675 -
Lal8g0309 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE 5 375 - -
Lal8g0309 633 Coils Coil 575 595 - -
Lal8g0309 633 Gene3D Ribonuclease Inhibitor 296 382 IPR032675 -
Lal8g0309 633 Pfam FAR1 DNA-binding domain 467 553 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0309 Lal-Chr8 2070325 2075022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0309 123 381 Receptor kinase-like Gene Family AT5G20480 27.027 3.35e-17 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal8g0309 FAR1 3.9e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0309 - - vra:106778464 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0368 25 2488592 2491552 Lal8g0309 8 2070325 2075022 LSH
Lal10g1069 10 17678316 17691353 Lal8g0309 8 2070325 2075022 LSH
Lal8g0309 8 2070325 2075022 Lal2g0177 2 1052372 1054689 PCT
Lal2g0177 2 1052372 1054689 Lal8g0309 8 2070325 2075022 PCT