Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0304 ATGTTGATGAGCCCATATAATCCTAAGCAAATTCATGAGATTAAAGACTTCCTTCTCACTGCAAGGAGGAAGGATGCACGTTCCGTTAAAATCAAGCGGAGCAAAGATGTGGTCAAGTTCAAGGTCCGTTGCTCCAGGTACCTGTACACTCTGTCTGTGTTTGATTCTGACAAGGCTGATAAGTTGAAGCAATCACTTCCTCCAGGTTTAACTGTGCAAGACCTGTAA 228 0.4342 MLMSPYNPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSRYLYTLSVFDSDKADKLKQSLPPGLTVQDL 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0304 75 Pfam Ribosomal L38e protein family 8 74 IPR002675 GO:0003735|GO:0005840|GO:0006412
Lal8g0304 75 Gene3D - 7 75 IPR038464 -
Lal8g0304 75 PANTHER 60S RIBOSOMAL PROTEIN L38 8 75 - -
Lal8g0304 75 PANTHER 60S RIBOSOMAL PROTEIN L38 8 75 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0304 Lal-Chr8 2040103 2042352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0304 8 75 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 92.647 6.95e-42 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0304 K02923 - csin:114310013 131.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0360 25 2438130 2439380 Lal8g0304 8 2040103 2042352 LSH