Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0303 ATGCACCACAACCACCACCACCATACATCAACAAGCCATGATAACTCTTCTGGCTCATGTCATAATGAACCTTCTAAGGATGGTAAATGGTCTTCCAAGCTTCTTAGGGACTGTGCTATAGCAATATCTGAAAGAGACTCCACCAAAATCCACCAACTTCTATGGATGTTAAATGAGCTTGCTTCCCCTTATGGAGATTGTGATCAGAAACTAGCTTCTTATTTCTTGCAAGCTTTTTTTTCCAAGGCCACAGGATCAGGCTATAGGTGTTACAAGACTTTATCCTCAGTTGCTGAGAAAAACCACTCCTTTGATTCAGCAAGAAAGTTAATACTCAAGTTCCAAGAGGTGAGTCCTTGGACAACTTTTGGACATGTAGCTTCAAATGGTGCTATTTTGGAAGCCTTAGAAGGTGAGACTAAACTACACATAATTGATATTAGCAACACCCTTTGCACTCAATGGCCTACTCTTTTAGAAGCCTTGGCTACAAGAAGTGATGAAACTCCTCACCTTAAGCTCACTGTTGTCGCGATAACCGCGAGCTTAGTAGGGTCTGTTATGAAGGAAGTTGGGCAAAGGATGGAGAAGTTTGCCAGGCTAATGGGGGTGCCCTTTGAATTTAACATGATTAGTGGTTTGAATCACCTCACAAAAGAAGGGTTAGGGGTTCAAGAGGATGAGGCTATTGCTGTGAATTGTGTTGGGGGATTGAGAAGATTGGAAGTGGAAGAAAGGGAAGGTGTGATTTCCATGTTCAAATCTCTTAGTCCAAAGGTGGTTACTATTGTTGAGGAAGAAGCAGATTTCTGCACCTCAAAAGATGAGGATTTTGTTAAGTGCTTTGAAGAGTGCCTTAGGTTTTACACCCTCTATTTTGAGATGCTGGAAGAGAGTTTTCCACCAACAAGCAATGAAAGGTTGATGTTAGAAAGGGAGTGTTCTAGAAGCATGGTTAGGGTTTTGGCTTGCAATAACAGTGATGAACTTGAAGATGGAGATTGTTGTGAGAGAAGGGAGAGAGGAGGACAATGGTGTGAAAGGCTTAAGAAGGAGTTTTCATCAGTTGGGTTTAGTGATGATGTTGTTGATGATGTCAAAGCATTGCTCAAGAGGTATAGATCAGGTTGGTCACTTGTAGTGCCTCAAGGAAATGATCATGTTTTGGGAATTTACTTGACATGGAAAGATGAACCTGTAGTTTGGGCATCAGCATGGAAACCCTAG 1227 0.4181 MHHNHHHHTSTSHDNSSGSCHNEPSKDGKWSSKLLRDCAIAISERDSTKIHQLLWMLNELASPYGDCDQKLASYFLQAFFSKATGSGYRCYKTLSSVAEKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLEALATRSDETPHLKLTVVAITASLVGSVMKEVGQRMEKFARLMGVPFEFNMISGLNHLTKEGLGVQEDEAIAVNCVGGLRRLEVEEREGVISMFKSLSPKVVTIVEEEADFCTSKDEDFVKCFEECLRFYTLYFEMLEESFPPTSNERLMLERECSRSMVRVLACNNSDELEDGDCCERRERGGQWCERLKKEFSSVGFSDDVVDDVKALLKRYRSGWSLVVPQGNDHVLGIYLTWKDEPVVWASAWKP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0303 408 Pfam GRAS domain family 33 407 IPR005202 -
Lal8g0303 408 MobiDBLite consensus disorder prediction 1 30 - -
Lal8g0303 408 PANTHER PROTEIN SHORT-ROOT-LIKE 4 407 - -
Lal8g0303 408 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 407 IPR005202 -
Lal8g0303 408 ProSiteProfiles GRAS family profile. 22 407 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0303 Lal-Chr8 2035943 2037169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0303 6 408 GRAS Transcription Factor Family AT4G37650 51.896 2.04e-148 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal8g0303 GRAS 1.4e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0303 - - lang:109357825 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0303 8 2035943 2037169 Lal8g0303 8 2035943 2037169 ECH
Lal20g0990 20 13049240 13050925 Lal8g0303 8 2035943 2037169 PCT