Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0291 ATGCCGCGGGGGAAGATCAGGGCGAAGCTCCGAAGGAGCCATCTTTACACATTTGGTTGCGTTCGCCCAACCACCACCGATGAGTTTCCCAATCCACTTCATGGTCCTGGATTCTCAAGAACAGTATATTGCAACCAGCCTCTAGTCCATGAAAAAAATTCTTTATTTTACTGCAGGAATAATGTCTCAACTACCAAATACAATATTATCACATTTTTTCCTAAGGCACTCTTTGAGCAATTTCGAAGGGTTGCTAATATATACTTTCTTCTGGCTGCTTGCCTGTCAGTGTCTTCGATTTCACCATTTAGCCCAATGAGCATGATTGCTCCTTTGGTGTTTGTTGTGGGGCTTAGTATGGCGAAGGAAGGGTTGGAAGATTTTGGCAGGTTCCTTCAGGATGTCAAAGTTAATGGTCGGAAAGCTAGTATCCATAAAGGTGATGGCATTTTTGGTCCCAGGTCATGGCAGAACATTATGGTTGGGGATATCATAAAAGTGGAGAAGGACCAATTTTTCCCATCGGACTTACTTCTCTTGTCATCAAGTTATGAAGATGGGATATGCTATGTTGAGACGATGAATTTAGATGGTGAGACCAACTTGAAGGTGAAAAGATGTTTGGAGGCTACCTTGTCTCTAGATAATGATAAAGCTTTTGAGGGTTTCTCAGGAACAATACATTGTGAAGACCCAAATCCGAATCTTTATACTTTTGTTGGCAACTTTGAGTATGAGAATCAGGTTTATGCTCTTGATCCTAGTCAAATTCTCCTCCGAGATTCAAAGCTTAGGAATACTGATTATATCTATGGGGTGGTCATTTTCCCTGGTCATGATAGCAAAGTCATGCAGAATTCTACAAAATCACCTTCAAAAAGGAGCACAATAGAGAAAAAGATGGATTATATCATATACGCTCTTTTCACGGTGCTTATACTGATATCCTTTATTAGTTCAATAGGATTTGTTGCCAAGACCAAGTACCAAGTCACAAAATGGTGGTACTTACGGCCTGACAATATTGAAGACCAGTATAACCCCAGGAAAATTTTATTGGCTGGGATGAGCCATCTGATTACTGCACTCATTCTTTATGGATATTTGATACCCATCTCTCTTTATGTTTCAATTGAGATCGTAAAGGTATTACAAGCAACCTTCATTAACAAAGACATTCACATGTATGATGAAGTAACTGGGACTCCAGCCAATGCGCGGACATCAAATTTGAATGAAGAGTTGGGCCAGGTAGACACTATCCTCTCTGATAAAACTGGCACTTTAACCTGCAATCAGATGGATTTTTTGAAGTGCTCCATTGCTGGTACTGCATATGGTGTGCGTGCTAGTGAAGTTGAACTTGCTGCAGCAAAGCAAATGGCTTCTGATGTTGAGGATCAGGATTCGGATCTCTCTAATTTCCCCATGTCTAAGAGTAATACGCCATCGAAAAAGGTTACAGCAGGTGAAGAAATTGAACTGGAGACTATTGTTACTTCCAAGGTTGATGAGGACCAAAAGCCTCCCATAAAGGGATTTGGTTTTGAAGACAACCGTCTCATAAATTGTAACTGGTTGAATGAACCCTATGCCGATGTTCTTTTGATGTATTTCCGAATATTAGCAGTTTGCCATACTGCCATTCCTGACCTGAATGAGGAGATTGACAGTATTACATATGAAGCTGAGTCACCAGACGAAGGGGCTTTTCTTGTAGCAGCTAGAGAATTTGGTTTCGAGTTTTATAAAAGAACTCAGTCAACCGTTGTAGTACATGAAAGATTCGCTGCTTCAGGACAAGTGGTTGAAAGAGAGTATAAAATCTTGAATCTGTTGGATTTTACTAGCAAAAGAAAGCGTATGTCTGTGATTGTGCGTGATGAGGAGGGAAGCATTATTCTTTTTTGCAAAGGAGCTGACAGTATCATATTTGATCGATTGTCAAAGAATGGAAAACAATATTTGGAGGCTACTACTAAACATTTGAATGAATATGGAGAAGCTGGTTTGAGAACACTAGCCCTGGCTTACAGAAAGCTTGATGAGCAAGAATTCTCTGATTGGAATAATGAGTTTCAAGAAGCCAAGACAGCTGTTGGGCCTGACAGAGAGGCGACACTTGAGCGGTTATCAGATATCATCGAACGAGAGTTGATTCTTGTCGGGGCTACTGCTGTAGAAGATAAACTGCAGAAAGGGGTGCCTCAATGCATTGATAAACTTGCCCAAGCTGGTCTAAAGATCTGGGTATTGACAGGGGATAAGATGGAAACTGCAATCAACATTGGATTCGCTTGTAGTTTGCTACGACAGGGCATGAAGCAAATCTGTATCACTCTCCCAAATTCAGATTCACTAACCAATGATATCAAAGAGGCAGTCATTGTAACCCTTCAGGTTATTAAAAGCAATATCTTGAACCAAATCACTAATGCCTCACAAATGATAAGACTGAACAAGGATCCACATGCGGCATTTGCATTAATTATTGAAGGGAAAACTCTCACATATGCTTTAGAAGATGATGTCAAGCATCATTTTTTGGGATTGGCTGTTGATTGCGCATCTGTCATTTGCTGTCGCGTGTCTCCCAAGCAAAAGGCAATGGTAACAAGGTTAGTGAAACAAGGAACTGGGAAGACCACTCTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAGGAAGCAGATATTGGTGTTGGAATCAGCGGGGTTGAAGGTATGCAGGCGGTGATGGCTAGTGACTTTTCTATCGCCCAATTTAGGTTTTTGGAGAGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCGCAAATGATATGTTATTTCTTCTACAAAAATATAGCATTTGGCCTCACGATATTCTATTTTGAGACCTATGCGGGCTTCTCTGGTCAATCGGTTTATGAAGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTGCCGGTCATTTCACTTGGTGTTTTTGAACAAGATGTTCCATCTGAAGTTTGCTTACAGTTTCCTGCACTGTACCAGCAAGGACCCAAAAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGCAATGGCCTCTATACCTCCCTCATTACCTACTTCGTCGTTATCATTATTTTCTATGACCAAGCATTCCGTTGGGATGGCCAGACTGCAGATATGGATGCCGTTGGTACTATAATGTTCACTTGCATCATCTGTGCTGTTAACTGCCAGATTGCACTGACAATGAGCCATTTTACATGGATTCAACACCTCTTTGTGTGGGGAAGCATAGCCACTTGGTATCTCTTCCTCTTATTATATGGAATGCTTCCTCCGGTATACTCCAAGAATGCCTACCAAATTTTGGTTGAAGTTCTTGCTCCTGCACCTATTTATTGGACAGCAACCCTTATAGTAACAATTACATGCAATCTTCCATATCTTGTCCACATATCCCTCCAAAGATGTTTCAATCCCATGGATCATCACATTATCCAAGAAATTAAGCACTACAGGAAGGACATTGAAGATCAAGGCATGTGGAAGAGGGAACGTTCTAAGGCGAGACAGGAAACACAGATTGGATTCACAGCAAGAGTGGAAGCAAAGATGAGACAGTTGAGAGGGAAGCTTCAGAAGAAGACAACTTCAGTTGGATTTTTTTCACCTTCCTTTAAGAAAAAATAA 3702 0.4092 MPRGKIRAKLRRSHLYTFGCVRPTTTDEFPNPLHGPGFSRTVYCNQPLVHEKNSLFYCRNNVSTTKYNIITFFPKALFEQFRRVANIYFLLAACLSVSSISPFSPMSMIAPLVFVVGLSMAKEGLEDFGRFLQDVKVNGRKASIHKGDGIFGPRSWQNIMVGDIIKVEKDQFFPSDLLLLSSSYEDGICYVETMNLDGETNLKVKRCLEATLSLDNDKAFEGFSGTIHCEDPNPNLYTFVGNFEYENQVYALDPSQILLRDSKLRNTDYIYGVVIFPGHDSKVMQNSTKSPSKRSTIEKKMDYIIYALFTVLILISFISSIGFVAKTKYQVTKWWYLRPDNIEDQYNPRKILLAGMSHLITALILYGYLIPISLYVSIEIVKVLQATFINKDIHMYDEVTGTPANARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRASEVELAAAKQMASDVEDQDSDLSNFPMSKSNTPSKKVTAGEEIELETIVTSKVDEDQKPPIKGFGFEDNRLINCNWLNEPYADVLLMYFRILAVCHTAIPDLNEEIDSITYEAESPDEGAFLVAAREFGFEFYKRTQSTVVVHERFAASGQVVEREYKILNLLDFTSKRKRMSVIVRDEEGSIILFCKGADSIIFDRLSKNGKQYLEATTKHLNEYGEAGLRTLALAYRKLDEQEFSDWNNEFQEAKTAVGPDREATLERLSDIIERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITLPNSDSLTNDIKEAVIVTLQVIKSNILNQITNASQMIRLNKDPHAAFALIIEGKTLTYALEDDVKHHFLGLAVDCASVICCRVSPKQKAMVTRLVKQGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFETYAGFSGQSVYEDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYTSLITYFVVIIIFYDQAFRWDGQTADMDAVGTIMFTCIICAVNCQIALTMSHFTWIQHLFVWGSIATWYLFLLLYGMLPPVYSKNAYQILVEVLAPAPIYWTATLIVTITCNLPYLVHISLQRCFNPMDHHIIQEIKHYRKDIEDQGMWKRERSKARQETQIGFTARVEAKMRQLRGKLQKKTTSVGFFSPSFKKK 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0291 1233 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1172 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal8g0291 1233 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 858 967 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal8g0291 1233 SFLD p-type atpase 405 937 IPR044492 -
Lal8g0291 1233 SFLD Haloacid Dehalogenase 405 937 - -
Lal8g0291 1233 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 521 687 IPR023299 GO:0000166
Lal8g0291 1233 Gene3D - 434 470 IPR023299 GO:0000166
Lal8g0291 1233 Gene3D - 561 698 IPR023299 GO:0000166
Lal8g0291 1233 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Lal8g0291 1233 Gene3D - 718 926 IPR023214 -
Lal8g0291 1233 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1223 - -
Lal8g0291 1233 MobiDBLite consensus disorder prediction 468 488 - -
Lal8g0291 1233 SUPERFAMILY HAD-like 417 941 IPR036412 -
Lal8g0291 1233 CDD P-type_ATPase_APLT_Dnf-like 59 1046 - -
Lal8g0291 1233 SUPERFAMILY Calcium ATPase, transduction domain A 148 286 IPR008250 -
Lal8g0291 1233 Pfam Phospholipid-translocating P-type ATPase C-terminal 914 1164 IPR032630 -
Lal8g0291 1233 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1223 - -
Lal8g0291 1233 MobiDBLite consensus disorder prediction 468 487 - -
Lal8g0291 1233 Coils Coil 448 468 - -
Lal8g0291 1233 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Lal8g0291 1233 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Lal8g0291 1233 PRINTS P-type cation-transporting ATPase superfamily signature 886 905 - -
Lal8g0291 1233 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1156 IPR023298 -
Lal8g0291 1233 Pfam Cation transport ATPase (P-type) 545 649 - -
Lal8g0291 1233 Gene3D - 419 433 IPR023214 -
Lal8g0291 1233 Gene3D - 136 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0291 Lal-Chr8 1963333 1970186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0291 1 1227 Primary Pumps ATPases AT1G17500 72.964 0.0 1891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0291 K01530 - gmx:100778710 2087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0338 25 2310847 2317773 Lal8g0291 8 1963333 1970186 LSH
Lal10g1088 10 17779438 17785666 Lal8g0291 8 1963333 1970186 LSH
Lal8g0291 8 1963333 1970186 Lal1g1370 1 15578351 15585726 PCT
Lal1g1370 1 15578351 15585726 Lal8g0291 8 1963333 1970186 PCT