Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0277 ATGAGTCGAGAACAACAGAAGCGAGGGAAGCAAGAGAAAGGTTCCAATGGTGCTGAGAAGGTTATTGTTGCTGTCAAGGCATCAAAGGAAGTTCCAAAGACTGCTCTTGTTTGGTCTCTGACTCATGTTGTTCAACCTGGTGATTGCATTACACTGCTAGTGGTTGTGCCTTCTCAAAGTTCAGGCCGAAGGTTATGGGGTTTTCCGAGGTTTGCTGGTGACTGTGCCAATGGCCACAGGAAGTCTCATACTACAGAAACAAGTACAGAACAGAAGACTGACATCACTGATTCTTTCTCTCAGATGATCCTTCAGCTCCATGATGTCTATGATCCTAATAAAATAAATGTCAAGATTAAAATTGTTTCCGGGTCATCCTGTGGAGCAGTGGCTGCAGAAGCCAAGAAAATCCAAGCTAATTGGGTTGTTTTAGACAAACAGCTCAAACACGAGGAAAAGCGATGCATGGAAGAGCTGCAGTGCAACATCGTGGTTATGAAGCGTTCTCAACCAAAAGTACTCCGCTTGAATTTGGTTGGATCTCAAAAGAAGGATATTGAAGAAGCAGGTCCGTTACCTTCTGATCAAGATGGGATGCCTGGGAAACAAACCAAGAAGAATGATTCTTTTAATTCGATAAAAGGACTAGTTGTCACTCCAACTAGCAGCCCCGAGCTAGGCACATCATTTACTGCAACTGAAGTTGGTACCTCATCAGGTTCAAGCTCCGATCCAGGAACTTCACCATTCTTTATCTCTGAGATGATTGGTGAGTCAAAGAAAGAGGAAACTATCGAAGAAAATCAAGAACATGATGATAATAATTCAGACACAGACAGTGAGAATTTGTCTACATCTTCAGCAAGCTTGAGTTTCCAGCCATGGATCCCAGATATACTTTTACATCGACAATCTTTTCAATGCACAGATGAAAGATCAGCGAGGTATCATAATAAGCCTCAACCATCTACAGCTAGAGATTTGCTAAAAAAGTTCTCAAGGCTCGATAGAGAAGCTGAACTTGAAATCTCAACCTATAGAACTGACTTGGATTTTAGCGGAAATGTAAGAGAAGCAGTAGCATTATCTAGAAATGCCCCACCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCTCCTGTTTTTGGAAAACCTCCAAGGTTGTTCAGCTACACTGAGTTAGAGCTTGCTACTGGTGGATTTTCGCAAACTAATTTCTTGGCAGAAGGTGGATTTGGCTCTGTTCACAGAGGGATTCTGCCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGCGACGTTGAATTTTGTTCAGAGGTAGAAGTCCTGAGCTGCGCTCAGCACCGAAATGTAGTTTTGCTGATTGGGTTTTGTATAGAGGATAAGCGAAGGCTTCTGGTTTATGAGTTCATATGCAACGGATCTTTGGATTCTCATCTGTATGGGAGACAACGGGAACCATTAGAATGGCCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGAGGGTTGCGGTATCTACATGAAGAATGCAGAGTGGGTTGCATTATTCACCGTGACATGCGGCCAAACAACATTCTTATTACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCTAGGTGGCAGCCTGATGGAGACACAGGCGTGGATACTAGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAGAAGGCTGATGTTTATTCATTTGGAGTGGTATTAGTGGAGCTTATTACAGGGCGAAAAGCCGTCGATCTCAATCAGCCCAAGGGACAACAGTGTCTTACTGAGTGGGCACGACCACTGTTAGAAGAATATGCCATTGAGGAACTGATTGATCCGAATTTGAGAAGTCACTATTCAGAACATGAGGTCTATTGCATGCTACATGCTGCATCATTGTGCATAAAGCGAGATCCTTATTCTAGACCACGCATGTCACAGGTTCTTCGAATACTGGAGGGTGACGTGGTGATGGACACAAATTACATTTCAACTTCTGGTTATGATGTTGGAAACAGGAGTGGTTGA 2091 0.4338 MSREQQKRGKQEKGSNGAEKVIVAVKASKEVPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCANGHRKSHTTETSTEQKTDITDSFSQMILQLHDVYDPNKINVKIKIVSGSSCGAVAAEAKKIQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLVGSQKKDIEEAGPLPSDQDGMPGKQTKKNDSFNSIKGLVVTPTSSPELGTSFTATEVGTSSGSSSDPGTSPFFISEMIGESKKEETIEENQEHDDNNSDTDSENLSTSSASLSFQPWIPDILLHRQSFQCTDERSARYHNKPQPSTARDLLKKFSRLDREAELEISTYRTDLDFSGNVREAVALSRNAPPGPPPLCSICQHKAPVFGKPPRLFSYTELELATGGFSQTNFLAEGGFGSVHRGILPDGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVLLIGFCIEDKRRLLVYEFICNGSLDSHLYGRQREPLEWPARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVDTRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLNQPKGQQCLTEWARPLLEEYAIEELIDPNLRSHYSEHEVYCMLHAASLCIKRDPYSRPRMSQVLRILEGDVVMDTNYISTSGYDVGNRSG 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0277 696 MobiDBLite consensus disorder prediction 203 249 - -
Lal8g0277 696 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 694 - -
Lal8g0277 696 MobiDBLite consensus disorder prediction 185 288 - -
Lal8g0277 696 Pfam Protein tyrosine and serine/threonine kinase 407 672 IPR001245 GO:0004672|GO:0006468
Lal8g0277 696 ProSiteProfiles Protein kinase domain profile. 403 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0277 696 Gene3D Transferase(Phosphotransferase) domain 1 479 685 - -
Lal8g0277 696 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Lal8g0277 696 SUPERFAMILY Protein kinase-like (PK-like) 387 676 IPR011009 -
Lal8g0277 696 PANTHER OS01G0253100 PROTEIN 16 694 IPR045271 GO:0004714|GO:0006468
Lal8g0277 696 CDD STKc_IRAK 409 675 - -
Lal8g0277 696 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0277 Lal-Chr8 1861255 1867022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0277 383 692 Trihelix Transcription Factor Family AT1G70460 51.250 1.39e-101 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lal8g0277 PK_Tyr_Ser-Thr 2.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0277 - - gmx:100789216 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0277 8 1861255 1867022 Lal8g0277 8 1861255 1867022 ECH
Lal25g0320 25 2192661 2197967 Lal8g0277 8 1861255 1867022 LSH
Lal8g0277 8 1861255 1867022 Lal20g1101 20 15172362 15178220 PCT
Lal8g0277 8 1861255 1867022 Lal1g1356 1 15390935 15396773 PCT
Lal20g1101 20 15172362 15178220 Lal8g0277 8 1861255 1867022 PCT
Lal1g1356 1 15390935 15396773 Lal8g0277 8 1861255 1867022 PCT