Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0269 ATGAGGGAATTAGATTGTGACACAAAAAACTCTGGTGAAGTTATGGGCAAGGCTACAAGGTGGCTGAAGGGATTGTTCGGAATGAAGAAAGAGACGGAGCACTCTGAGAATTCAAGCCCATTCACTCCTGGCAAGGAGAGGAAAAGGTGGAGCTTCACTAGGTCATGCAAAGAAGATGTGAATCACATTACCCCAACTGTTCATAATGATTGGCTCAGGTCTTATTTTGCTGAGAAAGAAAAAACGCTGAAAAAACGCGCCATCACTATGGCTGGTGCAGATGCCACTGTGGTGGCGGTAAAGGCTCCAGTAACTGTTGTGAAGCTAAGAAGGCATGGTAGTGGTACATTGTTTAGTGGAGGCATAGGGTGGTGGGCTGCTTTAAAGATTCAATCTTTTTTCAGAGGGTATCTGGCAAGGAAGGCTCTTAGAGCACTCAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATCTAATTCGGAAAAGGGCTGCTGCAACTCTTCATAGTATGCAAGCTCTAATGAGAGCTCAAGTTGCTATTACCTCCCAGCGAGCTCATCGGTACATGAGCATGGGGAGTAGATTACAACCTGGAACTCATGCTAGAAAACACATGCAAAGGTTTGATGAAATACGAAGTGAATTCCAAAGTAAAAGGCCTGCAACATCTTGTAAAACATCCTTCAATGGATTTGATGAGAGCCCAAAATTTGTTGAAATTGACAACCACATACCTCATCAATTAAGGAATAGGCACACTACCACTGCAATGTCTGAATGTGGAAAAGAATTGTGTTATCCTTGTCGAATATCAGTTCCTGAATGCAGACCACAACAAGATTGTGAATTGTGCTTCAATGAATGCAAGTTCTCCATGGCTCACAGCACACCTCGTTTAGCAAATTATTGTATGCTGCATAATGCCCCACCCACACCAGTGAAGAGTGTTTGTGGAGACACCCTCTTGAGTACTTGCCCTGATTCCCCCAACTACATGGCCAATACTCAATCATCCAAGGCAAAACTAAGGTGTCACAGTGCCCCAAGGCAAAGACCTGAGCAAAAGAAAAGGCTTTCAGTCAATGAAACAATGGCTGCAAGAAATAGCATAAGTAGTGTTAGAATGCAGTCCAGTCCACAAACTGAAGAATACAGCATTCTTAACAAGGTTGTTCAAGAATATTATGTCAATTGGGAAAGTCAAAGTAAAATTTGA 1221 0.4267 MRELDCDTKNSGEVMGKATRWLKGLFGMKKETEHSENSSPFTPGKERKRWSFTRSCKEDVNHITPTVHNDWLRSYFAEKEKTLKKRAITMAGADATVVAVKAPVTVVKLRRHGSGTLFSGGIGWWAALKIQSFFRGYLARKALRALKGLVKIQALVRGYLIRKRAAATLHSMQALMRAQVAITSQRAHRYMSMGSRLQPGTHARKHMQRFDEIRSEFQSKRPATSCKTSFNGFDESPKFVEIDNHIPHQLRNRHTTTAMSECGKELCYPCRISVPECRPQQDCELCFNECKFSMAHSTPRLANYCMLHNAPPTPVKSVCGDTLLSTCPDSPNYMANTQSSKAKLRCHSAPRQRPEQKKRLSVNETMAARNSISSVRMQSSPQTEEYSILNKVVQEYYVNWESQSKI 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0269 406 Gene3D - 125 176 - -
Lal8g0269 406 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 165 IPR027417 -
Lal8g0269 406 SMART iq_5 145 166 IPR000048 GO:0005515
Lal8g0269 406 SMART iq_5 126 144 IPR000048 GO:0005515
Lal8g0269 406 Pfam Protein of unknown function (DUF4005) 311 377 IPR025064 -
Lal8g0269 406 ProSiteProfiles IQ motif profile. 126 151 IPR000048 GO:0005515
Lal8g0269 406 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 15 381 - -
Lal8g0269 406 PANTHER IQ-DOMAIN 5-RELATED 15 381 - -
Lal8g0269 406 Pfam IQ calmodulin-binding motif 150 164 IPR000048 GO:0005515
Lal8g0269 406 Pfam IQ calmodulin-binding motif 126 144 IPR000048 GO:0005515
Lal8g0269 406 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0269 Lal-Chr8 1808852 1815200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0269 15 377 IQD Protein Family AT3G16490 43.979 8.20e-80 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0269 - - gmx:100797686 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0269 8 1808852 1815200 Lal8g0269 8 1808852 1815200 ECH
Lal8g0269 8 1808852 1815200 Lal1g1337 1 15133165 15136619 PCT
Lal8g0269 8 1808852 1815200 Lal18g0163 18 1318471 1321729 PCT
Lal1g1337 1 15133165 15136619 Lal8g0269 8 1808852 1815200 PCT
Lal18g0163 18 1318471 1321729 Lal8g0269 8 1808852 1815200 PCT