Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0264 ATGACTCGGCGGTGCTCTCACTGCAGCAACAACGGCCATAACTCCCGCACCTGTCCATACCGCGGCGGCGGCGGTGGTGGTGGTGGATTAGGTGTGAAGCTGTTTGGGGTGAGGTTAACGGATGGATTGATAATAAAGAAGAGCGCGAGTATGGGGAATCTCTCTGCTCATTATCATTCTTTGAATTCGAATTCTCCAACTCTCGTGGCTAACCCGGGTTCTCCGTGTTTCGACCCGATCCGTGAACCCGATGGTTATTTATCTGATGACCCGGCACATGCTTCTTCTTTCGCTAACCGTCGTGGTGAAAGGAAGAAAGGTGTTCCATGGACTGAAGAAGAACATCGGATGTTCTTAGTTGGTCTCCAGAAGCTGGGCAAAGGAGACTGGCGTGGAATAGCACGTAATTTTGTCGTGACAAGGACCCCTACTCAAGTTGCAAGTCATGCTCAGAAGTATTTTATCCGCCAGAGTAATGCTACCAGGAGAAAGAGACGTGCCAGTCTTTTTGACATGATTCCAGATATGTCTTCAGATCCGCCTTCAGTACCAGAAGAACAATTATTACTCACACCCTATGAGAACTCACAACCTTCTCATACAAAATCACATCCTTCATTAGATCTATCACTCAAGTCAGAATTTGAACCCATGGAAACTACTACTACTCAAGAAAATGAGGAAGGGCCCAATGAAACTATGACGGCATCAAATGGAAAGACACCAATGTCTCTTGCTTTCTTCCCAGCTTATGTACCTGTCCCATTTTCCATATGGCCATCAATCACGCCTCCCTTTGATGGATTAAATGGAAAGACATATCATCATCAGGTCGTGAAGCCTATCGCGGTCAAGGAACCCGTCAATGTTGACGAACTTGTGGGAATGTCTCATCTTAGCATTGGGGAAAGGGAAAGACGGGTATTTGATAGAGAGCCTTCACCACTTTCCTTAAGGTTGTCGGGAGAGCCCTCAAGGCAGTCAGCATTCCATGCAAATGCTCCAGTTGGTGGAGCGAGGAAGAACAGTGTAATTCAAGCGGTTTGA 1047 0.4699 MTRRCSHCSNNGHNSRTCPYRGGGGGGGGLGVKLFGVRLTDGLIIKKSASMGNLSAHYHSLNSNSPTLVANPGSPCFDPIREPDGYLSDDPAHASSFANRRGERKKGVPWTEEEHRMFLVGLQKLGKGDWRGIARNFVVTRTPTQVASHAQKYFIRQSNATRRKRRASLFDMIPDMSSDPPSVPEEQLLLTPYENSQPSHTKSHPSLDLSLKSEFEPMETTTTQENEEGPNETMTASNGKTPMSLAFFPAYVPVPFSIWPSITPPFDGLNGKTYHHQVVKPIAVKEPVNVDELVGMSHLSIGERERRVFDREPSPLSLRLSGEPSRQSAFHANAPVGGARKNSVIQAV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0264 348 SMART sant 106 156 IPR001005 -
Lal8g0264 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 158 IPR017930 -
Lal8g0264 348 Gene3D - 108 159 - -
Lal8g0264 348 MobiDBLite consensus disorder prediction 312 335 - -
Lal8g0264 348 PANTHER TRANSCRIPTION FACTOR KUA1 1 339 - -
Lal8g0264 348 MobiDBLite consensus disorder prediction 217 239 - -
Lal8g0264 348 Pfam Myb-like DNA-binding domain 109 154 IPR001005 -
Lal8g0264 348 ProSiteProfiles Myb-like domain profile. 102 154 IPR001005 -
Lal8g0264 348 SUPERFAMILY Homeodomain-like 104 159 IPR009057 -
Lal8g0264 348 MobiDBLite consensus disorder prediction 82 106 - -
Lal8g0264 348 PANTHER OS01G0187900 PROTEIN 1 339 - -
Lal8g0264 348 CDD SANT 109 154 IPR001005 -
Lal8g0264 348 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 105 157 IPR006447 GO:0003677
Lal8g0264 348 ProSiteProfiles SANT domain profile. 110 158 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0264 Lal-Chr8 1775097 1779234 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal8g0264 Myb_DNA-binding 3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0264 - - gmx:778036 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0264 8 1775097 1779234 Lal8g0264 8 1775097 1779234 ECH