Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0257 ATGGCATCATCCTTTTTGAACATCATGTGTACTTGTCTGGTCATTTTCTTGGTTGCTACGAATACTTGTGTTGTTGAAGCAGGAAGACAATTCAAAGTTGGTGATCACTTAGGTTGGCATGAACCTGTTCCTAGCAATGCTGTCTTTTATATCCAATGGGCTGAAAGGAACAGATTTCAAGTTGGAGATTCTCTCATGTTTGAGTACCAGAATGACTCAGTTCTTAGTGTGGAGAAAACAGACTACTTAAATTGTAATGCAAGCAATCCCATCACTGCCTTTGACAATGGGAAGAGTATTATGAATCTTGACAGGCCTGGTCCCTTCTACTTCATCAGTGGAATTGAAGATCATTGCACCAATGGTCAAAAGCTACTTGTGGAAGTGATGTCACAACATCCTATTCCAAAATCTTCACCATCACCTTCCATTTCCCATCCACCTCAAGGTTCCTCAGAAATGTCTCCTTCACTTTCACCTTATGCTTCTGATGATAGCTTAGGAGATTCAACCTCAGTTTCATCCTCTTTGGTGCTTGGTCCAGTCCCCATGGGTTCTTTAGTCACATTTGTAATTGTTCTGATGTTAGAACATTGA 597 0.407 MASSFLNIMCTCLVIFLVATNTCVVEAGRQFKVGDHLGWHEPVPSNAVFYIQWAERNRFQVGDSLMFEYQNDSVLSVEKTDYLNCNASNPITAFDNGKSIMNLDRPGPFYFISGIEDHCTNGQKLLVEVMSQHPIPKSSPSPSISHPPQGSSEMSPSLSPYASDDSLGDSTSVSSSLVLGPVPMGSLVTFVIVLMLEH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0257 198 ProSiteProfiles Phytocyanin domain profile. 29 131 IPR003245 GO:0009055
Lal8g0257 198 MobiDBLite consensus disorder prediction 134 167 - -
Lal8g0257 198 MobiDBLite consensus disorder prediction 133 167 - -
Lal8g0257 198 PANTHER BLUE COPPER PROTEIN 10 161 IPR039391 GO:0009055
Lal8g0257 198 Gene3D - 29 139 IPR008972 -
Lal8g0257 198 CDD OsENODL1_like 29 130 IPR041846 -
Lal8g0257 198 PANTHER EARLY NODULIN-LIKE PROTEIN 2 10 161 - -
Lal8g0257 198 SUPERFAMILY Cupredoxins 28 130 IPR008972 -
Lal8g0257 198 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0257 Lal-Chr8 1721013 1722092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0257 8 145 Phytocyanin Superfamily AT1G79800 48.571 2.98e-43 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0257 - - gmx:102664880 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0257 8 1721013 1722092 Lal8g0257 8 1721013 1722092 ECH
Lal25g0301 25 2062210 2062970 Lal8g0257 8 1721013 1722092 LSH
Lal10g1121 10 18024868 18025729 Lal8g0257 8 1721013 1722092 LSH