Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0251 ATGTTTGCAGACATGTCTAACAACCCTTCTCCCACTTCTAATACCAACAAAGATTTCTTTTCCACTCCAGCTCTTTCTCTTACTCTTGCTGGGATATTTCGCCATGCTGGGGCGGTGGCGGCGGTGGAGGATGGTGAGGCGGCAACTTCAAACATGGAGGTGGATGAGGGGAGTGGTGGGAAAAGAGAGGGCACAGTTGAGATAATAAGCAGTGAGAACTCGGGGCCCACGAGATCAAGATCAGAGGATGATATTGAAGGAGAACGTGAACATGAAGATGATGATGATGATGATGGTGGAGATGATAATAATAATAAGAACAAGAAGAAGAGGAAGAAATATCATAGGCACACTGCTGAACAGATCAGAGAAATGGAAGCACTTTTCAAGGAGTCACCACATCCTGATGAAAAGCAGAGGCACCAACTTAGCAAGCAATTAGGCCTTGCTCCTAGGCAAGTCAAGTTTTGGTTCCAAAACCGTAGAACCCAAATCAAGGCAATACAAGAGCGTCATGAGAATTCATTGTTGAAGACAGAAATAGAGAAACTACAAGAGAAAAATAAGAAGTTGAGAGAGACCATAAACAAAGCATGTTGCTCCAACTGTGGGGTATCCACCACTAATAGAGATGGTATCATGCAAACCGAAGAACAACAACTACGTATTGAAAATGCCAAACTTAAAGCTGAGATAGAGAAGCTACGAGCAGCATTAGGGTCAACTTCACCTTCATGTTCTGGTGGCAATGACCAAGAGAATAAAACTTCTTTGGAACTTTACAGTGGAAATTTTGGAGTTGATAAGTCAACGATAATGGAGAAAGTAAACCAAGCAATGGAGGAGCTCATAAAGATGGGTACAGTAGGGGAACCACTATGGTTTCGTAGTGTTGAGACTGGTCGTGATATACTTAATTATGATGAATATATGAAGGAGTTTGCAATTGAAAATTCAAACAGTGAAAGACCAAAGAGATCCATTGAAGCCTCAAGAGATACTGGGGTTGTTTTTGTGGATCTCCCACGGTTACTCCAAAGTTTTCTAGATGTGAATCAATGGGAGGAAATGTTTACATGTTTAATATCTAAGGCAGCAACTGTTGATATTATATGCAATGGAGAAGGTCCTAACAAGAATGGTGCAGTGCAACTGATGTTTGCTGAGCAGCAAATGCTAACACCAATGGTGGCCACAAGGGAATTGCATTTTGTCCGATACTGCAAGCAATTGAATGCAAAACAGTGGGCAATTGTTGATGTATCCATAAACAAAGTAAAAGACAATATTGATGCCTACAGCCTCAAATGCAGAAAACGTCCATCTGGTTGCATTATTGAGGATAAGTCAAATGGTCATTGCAAGGTAATCTGGGTGGAACATGTAGAATGCCAGAAGAGTGCAGTCCATACAATGTATCGCACCATTGTAAACAGTGGTCTAGCTTTTGGGGCAAGGCACTGGATTACAACACTGCAGCTTCAATGCGAACGGCAACTTTTCTTCATGGCAACAAATGTTCCTATGAAGGATTCAATTGGTGTTGCTACATTGGCTGGGAGAAAAAGCATTTTGAAATTGGCACAAAGAATGACATGGAATTTCTGCCATGCAATTGGCGCATCAAGCATCCATAAATGGACTAAGGTTACAAGTAAAACAGGAGAAGACATAAGGATTAGTTTTAGAAAGAACTTGAATGACCCTGGTGAACCTGTTGGAGTGATATTGTGTGCTGTTTCTTCTGTATGGTTGTCAGTCTCACCTAATGTTCTATTCGATTTCTTGAGAGATGAAGCTCGAAGGACCGAGTGGGATATTATGTCAAGTGGTGGCTCAGTGCAGTCAATTGCCAATTTAGCCAAAGGACAAGACAGAGGAAATGCAGTAACCATCCAAACAGTTAAATCCAAAGAAAACAATATGTGGATAGTGCAAGATAATAGCACAAACCCTTATGAGTCAATGGTGGTATATGCTCCTGTGGACATAGCTGGTATTCAATCTGTGATGACAGGATGTGATTCAAGCAATCTTACAATACTACCTTCAGGGTTCTCAATTATTCCTGATGGTTTTGAATCAAGGCCATTGTTGATTAGTTCAAGGCAAGATGAAAAAAACACAGAAGGTGGATCTTTATTTACAATAGCATTGCAGATCCTTACCAATGTTTCTCCAACAGCCAAGTTAAGTGTGGAGTCTGTGGACACGGTTAACAATCTTGTGTCTTGTACATTGAGAAATATCAGAACAAGTTTACAATGTGAAGATGGTTAG 2280 0.4088 MFADMSNNPSPTSNTNKDFFSTPALSLTLAGIFRHAGAVAAVEDGEAATSNMEVDEGSGGKREGTVEIISSENSGPTRSRSEDDIEGEREHEDDDDDDGGDDNNNKNKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRHQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLQEKNKKLRETINKACCSNCGVSTTNRDGIMQTEEQQLRIENAKLKAEIEKLRAALGSTSPSCSGGNDQENKTSLELYSGNFGVDKSTIMEKVNQAMEELIKMGTVGEPLWFRSVETGRDILNYDEYMKEFAIENSNSERPKRSIEASRDTGVVFVDLPRLLQSFLDVNQWEEMFTCLISKAATVDIICNGEGPNKNGAVQLMFAEQQMLTPMVATRELHFVRYCKQLNAKQWAIVDVSINKVKDNIDAYSLKCRKRPSGCIIEDKSNGHCKVIWVEHVECQKSAVHTMYRTIVNSGLAFGARHWITTLQLQCERQLFFMATNVPMKDSIGVATLAGRKSILKLAQRMTWNFCHAIGASSIHKWTKVTSKTGEDIRISFRKNLNDPGEPVGVILCAVSSVWLSVSPNVLFDFLRDEARRTEWDIMSSGGSVQSIANLAKGQDRGNAVTIQTVKSKENNMWIVQDNSTNPYESMVVYAPVDIAGIQSVMTGCDSSNLTILPSGFSIIPDGFESRPLLISSRQDEKNTEGGSLFTIALQILTNVSPTAKLSVESVDTVNNLVSCTLRNIRTSLQCEDG 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0251 759 ProSitePatterns 'Homeobox' domain signature. 143 166 IPR017970 GO:0000981|GO:0006355
Lal8g0251 759 Gene3D - 98 184 - -
Lal8g0251 759 ProSiteProfiles 'Homeobox' domain profile. 108 168 IPR001356 GO:0003677
Lal8g0251 759 CDD homeodomain 111 166 IPR001356 GO:0003677
Lal8g0251 759 CDD START_ArGLABRA2_like 269 497 - -
Lal8g0251 759 ProSiteProfiles START domain profile. 265 501 IPR002913 GO:0008289
Lal8g0251 759 SMART HOX_1 110 172 IPR001356 GO:0003677
Lal8g0251 759 Pfam START domain 277 498 IPR002913 GO:0008289
Lal8g0251 759 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 18 756 - -
Lal8g0251 759 MobiDBLite consensus disorder prediction 47 118 - -
Lal8g0251 759 SMART START_1 274 498 IPR002913 GO:0008289
Lal8g0251 759 Coils Coil 214 238 - -
Lal8g0251 759 SUPERFAMILY Homeodomain-like 99 169 IPR009057 -
Lal8g0251 759 SUPERFAMILY Bet v1-like 267 498 - -
Lal8g0251 759 SUPERFAMILY Bet v1-like 520 692 - -
Lal8g0251 759 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 18 756 IPR042160 -
Lal8g0251 759 Coils Coil 167 201 - -
Lal8g0251 759 Pfam Homeodomain 111 166 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0251 Lal-Chr8 1678911 1683771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0251 69 758 Homeobox Transcription Factor Family AT1G79840 63.909 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal8g0251 START 1.4e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0251 K09338 - gmx:100808292 1192.95