Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0244 ATGGGTAAGGGAACGGGGAGTTTCGGTAAGAGGAGAAACAAGACTCACACTCTCTGTGTCAGGTGTGGCCGCCGCAGCTTCCACCTCCAAAAGAGTCCTTGCTCCGCCTGCGCTTATCCTGCTGCTCGCATTCGCAAATATAACTGGAGTGTTAAAGCAATCCGCAGAAAGACCACTGGAACTGGTAGGATGAGGTACTTGCGACACGTCCCTCGCCGATTCAAGAGTGGATTCAGAGAAGGTACTGAAGCTGCACCAAGGAAGAAGGGAGCAGCTGCCACTGCCTAA 288 0.5312 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSPCSACAYPAARIRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKKGAAATA 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0244 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Lal8g0244 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Lal8g0244 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 93 - -
Lal8g0244 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Lal8g0244 95 PANTHER RIBOSOMAL PROTEIN L37 1 93 - -
Lal8g0244 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0244 Lal-Chr8 1633605 1634472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0244 1 95 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 86.316 1.68e-56 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0244 K02922 - atr:18426594 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0244 8 1633605 1634472 Lal8g0244 8 1633605 1634472 ECH