LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal8g0242	ATGACGCCACGTGGTAGGTGGCTCATAAAAGCTTCAAGATTTTTGAATGTGAAGCCAAACAAGCGCGCAACGTTAACTAGACTCAAAACATCGGTGGTCCCCACCCATGTGAAAGGGGACCCTATCAAACACAATCTTCCTTCGTTGAATTTCAAAGTTCATCACTGCACTAATATACTTTGTTCCTCCTTTCTCTTCGGTTTCTGTCTATTCTACTACTTCATCACTGTTCAGCACTTTCCGTTTCTAGAACCTTCGGATCTGATTAAGATGAACGGTGGAGGAAGGCAGGGACAGAGATCTGGTGCGCCGTCAGTGCACCACCAGCGTCAGTACTCCGATAACTTTCTCGACGGTTCCTCCAATGCCAGGTGGTTACAATCGGCTGGTCTTCAGCACCTTCAATCCTCTTCCGCTACGCTTCAGGGTGGAAGAACGTTCAGGAATCAACAGAGGAGTTTTAATGGAGGGAGTGGAAATCAGTATTATATGGAGCCTTCAACTCCTCCTGGTAATAATAACCGTTTGATGCAGAAAAGTAGCGGTGAAGATTTGCCCGGTGATTTCAGTCCTGGATTGTTGGATCTGCATTCATTTGATACTGAGCTTATTCCTGAGATGCCAGTGTCAAATGTGTTGCCTCCTGGCCGGACTAGAAGCTTTGAAGACTCTGAATCTTACATATTGAGCAAACAGACTGGCAGAGCTCGTATTCCTGCTCCGGAAAACATGTTGAAAAGTTTTCCTTCAGACAAAGAGAAATTCAGTTCTGTAGCAAAGATTAAAGTTGTGGTTCGTAAGAGACCACTTAATAAGAAGGAATTAGCAAAGAATGAGGAAGACATTATAGATACATATTCCAATTCTTTAATAGTGCATGAGACTAAACTGAAGGTTGACTTAACTCAGTATGTAGAGAAGCATGAATTTGTTTTTGATGCTGTATTGAATGAAGAAGTTACAAATGATGAGGTGTATCGTGAAACTGTGGAGCCCATAGTTCCTATAATCTTTGAACGCACTAAGGCAACTTGCTTTGCATACGGGCAAACAGGAAGTGGGAAAACTTACACGATGAAGCCATTGCCGTTCAGAGCATCTAGAGACATATTGAGATTGATGCATCATACTTACAGGAATCAGGGATTTCACTTATTTGTTAGTTTCTTTGAAATATATGGTGGGAAGCTTTATGATCTTCTGAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAATACCGAGTATCGGATGTGGAGAACATAAAAGAACTGATTGAGAGGGGAAGTGCCACAAGAAGTACTGGTACCACTGGCGCAAATGAGGAATCGTCACGGTCACATGCAATACTTCAGCTTGCTATCAAGAGGTCAGTTGATGGCAGTGAATCCACACCACCCCGTCTTGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACCACAGATAATGACAAACAAACAAGAATAGAAGGTGCTGAGATCAATAAGAGCTTACTTGCTCTGAAGGAATGCATAAGAGCTCTTGATAATGACCAGGGTCACATCCCTTTCAGAGGCAGTAAACTAACTGAAGTTCTGAGGGATTCATTTGTTGGCAATTCCCGCACTGTTATGATATCATGTATATCACCAAGCTCAGGTTCATGCGAACATACCCTGAATACGTTAAGATATGCTGACAGGGTAAAAAGCTTATCGAAAGGGAACAATTCCAAAAGAGAGGTTTTATCTTCGAATATCAGCATTAAAGAATCTACTACAGTTTCCTTATCTTCTGTTACTGCATCGGGCAATGAGGATCAGACAGTTGATACATTGCACGATGAAAATAATGGAGATGATTTTAGTCCTCCTGAGGATTACTACGAGCCGGTGAAACCATCATGGAAGAAAAATGTACAGATGGATCCATATAGTACAACAGATGACAAACTGAAGAAACCCAGTAGTCTGGAAAAATGGAAGGATCTCCCAAAAGTTGAACATACAACTGCACATTCAGAGGATGATTTAAATGCCCTCCTACAAGAAGAAGAAGACCTCGTAAATGCTCACCGGACACAAGTAGAAGAGACCATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTAGAAGCAGATCAACCAGGGAATCAGCTGGATGATTATATTACTAGACTAAATGTCATTCTTTCACAGAAGGCTGCTGGCATCCATGATTTACAGACCCGTCTGGCTCAGTTTCAGAAACGTTTGAAGGAGCATAATGTTTTGGTTTCATCTTCTGGGTACTAA	2328	0.4201	MTPRGRWLIKASRFLNVKPNKRATLTRLKTSVVPTHVKGDPIKHNLPSLNFKVHHCTNILCSSFLFGFCLFYYFITVQHFPFLEPSDLIKMNGGGRQGQRSGAPSVHHQRQYSDNFLDGSSNARWLQSAGLQHLQSSSATLQGGRTFRNQQRSFNGGSGNQYYMEPSTPPGNNNRLMQKSSGEDLPGDFSPGLLDLHSFDTELIPEMPVSNVLPPGRTRSFEDSESYILSKQTGRARIPAPENMLKSFPSDKEKFSSVAKIKVVVRKRPLNKKELAKNEEDIIDTYSNSLIVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPFRASRDILRLMHHTYRNQGFHLFVSFFEIYGGKLYDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVENIKELIERGSATRSTGTTGANEESSRSHAILQLAIKRSVDGSESTPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKREVLSSNISIKESTTVSLSSVTASGNEDQTVDTLHDENNGDDFSPPEDYYEPVKPSWKKNVQMDPYSTTDDKLKKPSSLEKWKDLPKVEHTTAHSEDDLNALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYITRLNVILSQKAAGIHDLQTRLAQFQKRLKEHNVLVSSSGY	775

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal8g0242	775	Coils	Coil	749	769	-	-
	Lal8g0242	775	PRINTS	Kinesin heavy chain signature	340	361	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal8g0242	775	PRINTS	Kinesin heavy chain signature	449	466	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal8g0242	775	PRINTS	Kinesin heavy chain signature	483	501	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal8g0242	775	PRINTS	Kinesin heavy chain signature	533	554	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal8g0242	775	PANTHER	KINESIN-RELATED PROTEIN 6	91	775	-	-
	Lal8g0242	775	PANTHER	KINESIN-LIKE PROTEIN KIN-13B	91	775	-	-
	Lal8g0242	775	Gene3D	Kinesin motor domain	239	586	IPR036961	-
	Lal8g0242	775	CDD	KISc_KIF2_like	260	581	-	-
	Lal8g0242	775	MobiDBLite	consensus disorder prediction	149	191	-	-
	Lal8g0242	775	MobiDBLite	consensus disorder prediction	605	619	-	-
	Lal8g0242	775	Pfam	Kinesin motor domain	266	582	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal8g0242	775	ProSitePatterns	Kinesin motor domain signature.	482	493	IPR019821	GO:0003777\|GO:0005524\|GO:0007018
	Lal8g0242	775	MobiDBLite	consensus disorder prediction	605	643	-	-
	Lal8g0242	775	ProSiteProfiles	Kinesin motor domain profile.	260	583	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal8g0242	775	SMART	kinesin_4	258	589	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal8g0242	775	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	255	583	IPR027417	-
	Lal8g0242	775	MobiDBLite	consensus disorder prediction	149	180	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal8g0242	Lal-Chr8	1624525	1630152	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal8g0242	259	632	Calmodulin-binding Proteins	AT5G65930	32.468	1.15e-46	178

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal8g0242	K10393		-	gmx:100799100	1127.85

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal8g0242	8	1624525	1630152	Lal8g0242	8	1624525	1630152	ECH