Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0241 ATGCTCTCTATTGGAGGAGGATCTCAAGACTCTTACACTCTAACTTCTTCAGAAGATGCTAAAAATGTCTCAGATTACTTATGGAACCATTTCTTGGGTGGCACTAATTACACTTCTTCACGCCCTTTTGGAGATGCTATATTAGATGGCATAGATTTTGACATATATGGAACTACATCACACTGGGATGAACTTGCACGTTATCTCAAGTCACACAACAACACAGCTACAAAAACTATATACTTAACTGCTGCACCTCAATGTGTATTTCCTGATTACACAATGGGTAGTGCCCTTAACACTGGGCTCTTTGACTATGTCTGGGTACAATTCTACAACAATCCTTCATGTGATTATGGTAAAGGAAGTATTGACAACATTGTGAATGCATGGAACAAGTGGACAACATCATTAAAAGGAGCAAAAGTATTTCTGGGGCTACCAGCAGATCCAGCAGCAGCTGCAACAGGTTATGTTCCACCTGATGTTTTAGCATCTAAGGTCTTACCTATAATAAATAAGTCACCTAATTATGGAGGTTTAATGTTGTGGTCAAGGTACTATGATAAAATGAGTGGATATAGTACTGACATTCAAGCTAGTGTTTTATGCACACAGCAGAGCATTCCTACATGCAGGAGCCATGACAGTGGCTTCACACAACGTTATGGTTACATGTCCATAGCTGGTGTCATGGTTTATGATGGTGACAAGAACATTGATGCAAAGTGCTGTGAGATCATATGTTGGAATAACTGTTCTTGTGAAGCTTATGCACTAGTGAATCATAATAACAACACTGGATGCCAGATATGGGGCAAAGGAGCGAGATTGGTTAGAGCTTCTGGAGAAAAGGGAGAGCCAATGATGTCAATTTACTTTGTTAAACACAAAGTGAACAGGTGGTGGATATGGCTCATAATTGGTGTTGGGGGAGCCCTTTCATTACCTGTGATCTTCTATTTATGCTATACCATGTGGAAAAAATACAGAGTAAAAGTGGATAGAAAAATGATGAAGAAGAAGTTATTACATGAGATTGGAGGTAATGCAATGCTTTCGATGGTGTACGGCAAAGCCAGGAAAAGAAAGAACAAGGAAAAGTCAAGCAATGAGGTCGAAATATTTAGTTTTGAAACCATTGTTGCTGCCACAAACAATTTCTCAGTTGCTAATAAGCTAGGAGAGGGTGGTTTTGGTCCTGTATATAAGGGAACTTTAAGTGATCAGCAAGAGGTAGCAATAAAGAGACTTTCTAAAAGTTCAGGTCAAGGGCTGATAGAGTTTAAGAATGAAGCTAAACTCATGGCTAAACTCCAACACACTAATCTTGTAAAGCTTTTAGGATTCTGCATCGAGAGAGATGAAAGAGTACTAGTTTATGAGTACATGTTGAATAAGAGCTTAGACTTCTACCTATTTGATTCAACTAGAAAGAATTTGCTAGATTGGGCAAAACGCTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTTCACAAGTATTCAAGGCTAAAGGTGATACACCGGGACCTCAAAGCAGGCAATATATTACTTGATGAAGAGTTGAATCCTAAAATATCTGATTTTGGCATGGCTCGAATTTTTGGTCTTAGAGGATTAGAAGAAAACACAAACAGAGTTGTTGGTACATATGGCTACATGTCTCCTGAGTATGCAATGAATGGCGTTGTGTCAATCAAAACAGATGCCTGGCAGCTTTGGAATGAAGGCAAAGCTCCTGACCTAATAGACCCAGCATTTAATGAGTCAAGTAATGAGAATGAAGTTGTGAGATGTATTCACATTGGTCTATTGTGTGTACAAGATCAAGCAACAGATAGACCTACAATGTTAGAGGTTGTTTCTTTTCTATCAAATGATACAATCAAACTTCCCCAACCAAAGCAACCAGCATTCTTCATCAATGTTGTTGTGGAAGAGTCAGAGCTTCCTAATAGTAGGCAAGAATATCATACCTTAAATGGTGTAACAATTTCTAGTATGTATGGCAGGTAG 2025 0.3877 MLSIGGGSQDSYTLTSSEDAKNVSDYLWNHFLGGTNYTSSRPFGDAILDGIDFDIYGTTSHWDELARYLKSHNNTATKTIYLTAAPQCVFPDYTMGSALNTGLFDYVWVQFYNNPSCDYGKGSIDNIVNAWNKWTTSLKGAKVFLGLPADPAAAATGYVPPDVLASKVLPIINKSPNYGGLMLWSRYYDKMSGYSTDIQASVLCTQQSIPTCRSHDSGFTQRYGYMSIAGVMVYDGDKNIDAKCCEIICWNNCSCEAYALVNHNNNTGCQIWGKGARLVRASGEKGEPMMSIYFVKHKVNRWWIWLIIGVGGALSLPVIFYLCYTMWKKYRVKVDRKMMKKKLLHEIGGNAMLSMVYGKARKRKNKEKSSNEVEIFSFETIVAATNNFSVANKLGEGGFGPVYKGTLSDQQEVAIKRLSKSSGQGLIEFKNEAKLMAKLQHTNLVKLLGFCIERDERVLVYEYMLNKSLDFYLFDSTRKNLLDWAKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKAGNILLDEELNPKISDFGMARIFGLRGLEENTNRVVGTYGYMSPEYAMNGVVSIKTDAWQLWNEGKAPDLIDPAFNESSNENEVVRCIHIGLLCVQDQATDRPTMLEVVSFLSNDTIKLPQPKQPAFFINVVVEESELPNSRQEYHTLNGVTISSMYGR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0241 674 CDD GH18_hevamine_XipI_class_III 1 198 IPR045321 -
Lal8g0241 674 Gene3D Glycosidases 1 215 - -
Lal8g0241 674 Pfam Domain of unknown function (DUF3403) 629 674 IPR021820 GO:0004674
Lal8g0241 674 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 84 572 - -
Lal8g0241 674 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 573 643 - -
Lal8g0241 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 509 521 IPR008271 GO:0004672|GO:0006468
Lal8g0241 674 Gene3D Phosphorylase Kinase; domain 1 361 463 - -
Lal8g0241 674 Gene3D Transferase(Phosphotransferase) domain 1 464 574 - -
Lal8g0241 674 Gene3D Transferase(Phosphotransferase) domain 1 575 638 - -
Lal8g0241 674 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 205 IPR001223 GO:0005975
Lal8g0241 674 SUPERFAMILY Protein kinase-like (PK-like) 370 648 IPR011009 -
Lal8g0241 674 Pfam PAN-like domain 233 274 IPR003609 -
Lal8g0241 674 Pfam Protein kinase domain 389 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0241 674 SMART serkin_6 388 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0241 674 ProSiteProfiles Protein kinase domain profile. 388 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0241 674 Pfam Glycosyl hydrolases family 18 1 189 IPR001223 GO:0005975
Lal8g0241 674 PANTHER OS01G0783800 PROTEIN 84 572 - -
Lal8g0241 674 PANTHER OS01G0783800 PROTEIN 573 643 - -
Lal8g0241 674 SUPERFAMILY (Trans)glycosidases 1 197 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0241 Lal-Chr8 1619760 1623748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0241 361 658 Receptor kinase-like Gene Family AT4G23190 49.415 6.54e-110 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal8g0241 Glyco_hydro_18 1.1e-17 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0241 - - lang:109358482 1258.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0241 8 1619760 1623748 Lal8g0241 8 1619760 1623748 ECH