Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0238 ATGCCGAAGAAGATTCCAAAATTCCTTAGAGGTTACCTCTCTAGGATCAAAACCCATCACCCTGCTCAAATCCAATTATCCTTAAACTCATTTTCCTCTTCCAAGAGTTGGATTCTCTCTGGCCGCAAGAATCTAAAGACACGATCCTTTCATTTCGAGGATACAAATGAACCTCATCATGGCTGCAGCGACAACAACATCAATCACAAGGATGACACTGCAGCAACGTTAGCAGATGTTGATCGTTTCCTCTTGGAAAATTTCAAATCACTATACCTCAAAGACGACGACGACGACGATGATGATAAAGAAAAAGAAGAAAATGAGAATAAATACAAAAATACCAAAAGGGTACTCTTGGAAAAGCAAAACCATGATGAGGAAGTACCAAAACTAGGTCCTATCTTATATGATTCACCAAAGTTGGTGGAAATACCACGTCATCTTTGTGGCTCGACTAGGTTCTTTGTGAAGCCAGACTTCTCAAGATCATTGGTAGATGATGCAATGCCAAGCATGACAACAACACCAAGAAAAATGTTTGATCCTGATGAATCTTCATTAGGATCAAACAGAAGTGCAAAAACTCACTATGATAAAACTACAGTAGTACTTCCAGATAATTGCATAACACTACTGGCATACTCACTTAGCCCCTACGAGGAGTTTAGACGTTCAATGAAGGAGATGGTGGAAGCAAGAGGAAGGAGCCATGAAGGTGAGATTGATTGGGAGATCATGGAAGAGTTATTGTTTTGTTACCTAGACCTCAATGATAAGAAGTCACATAAGTTTATTCTTAGTGCTTTTGTTGATATTATCACTGCCATGCGTCAGAATTCTGAGACCACTATGGTAAAGGTGAAGCCACAAAAGGAACTGCAACTAATTAAATCAGTTGAGATTGAAATAACTCAATAA 921 0.3898 MPKKIPKFLRGYLSRIKTHHPAQIQLSLNSFSSSKSWILSGRKNLKTRSFHFEDTNEPHHGCSDNNINHKDDTAATLADVDRFLLENFKSLYLKDDDDDDDDKEKEENENKYKNTKRVLLEKQNHDEEVPKLGPILYDSPKLVEIPRHLCGSTRFFVKPDFSRSLVDDAMPSMTTTPRKMFDPDESSLGSNRSAKTHYDKTTVVLPDNCITLLAYSLSPYEEFRRSMKEMVEARGRSHEGEIDWEIMEELLFCYLDLNDKKSHKFILSAFVDIITAMRQNSETTMVKVKPQKELQLIKSVEIEITQ 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0238 306 PANTHER TRANSCRIPTION REPRESSOR OFP14 4 287 - -
Lal8g0238 306 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 287 IPR038933 GO:0045892
Lal8g0238 306 ProSiteProfiles OVATE domain profile. 212 276 IPR006458 -
Lal8g0238 306 MobiDBLite consensus disorder prediction 174 193 - -
Lal8g0238 306 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 211 278 IPR006458 -
Lal8g0238 306 Pfam Transcriptional repressor, ovate 216 276 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0238 Lal-Chr8 1604840 1605821 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal8g0238 Ovate 3.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0238 - - lja:Lj3g3v0160750.1 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0238 8 1604840 1605821 Lal8g0238 8 1604840 1605821 ECH
Lal10g1137 10 18096613 18097575 Lal8g0238 8 1604840 1605821 LSH
Lal8g0238 8 1604840 1605821 Lal20g1190 20 16372184 16374084 PCT
Lal8g0238 8 1604840 1605821 Lal18g0187 18 1535802 1538449 PCT
Lal20g1190 20 16372184 16374084 Lal8g0238 8 1604840 1605821 PCT
Lal18g0187 18 1535802 1538449 Lal8g0238 8 1604840 1605821 PCT