Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0237 ATGAGCGTTGTCGGTTTTGATTTTGGTAATGAGAGCTGCATTGTCGCTGTGGCGAGGCAGAGGGGGATTGATGTTGTGCTTAATGATGAGTCAAAGCGTGAGACTCCTGCAGTTGTATGCTTCGGTGACAAACAAAGGTTCATTGGAACAGCTGGGGCTGCAACTACTATGATGAACCCGAAGAATTCGATCTCACAGATGAAACGTTTGATTGGAAGGAAATTTTCCGATCCTGAATTGCAGCAGGATCTGAAGTCACTACCTTTTCTTGTCACTGAAGGGCCTGATGGATATCCATTAATTCATTCACGCTACTTGGGTGAAGCTAGGACATTCACACCAACCCAAGTACTTGGAATGATGTTTTCGAACCTTAAAGAAATTGCCCAGAAAAATCTAAATGCAGCCGTCGTTGATTGCTGCATTGGAATTCCAGTTTACTTTACTGATCTTCAAAGGAGGGCAGTCTTGGATGCAGCCACTATTGCAGGACTCCACCCACTTCGCCTCCTCCATGAAACAACAGCAACTGCCCTGGCTTATGGAATTTATAAAACTGATCTTCCTGAAAATGATCAGCTGAATGTAGCCTTTGTTGATATTGGACATGCTAGCATGCAAGTATGCATTGCTGGGTTTAAAAAGGGACAGCTGAAAGTGTTGGCTCATTCATATGATAGGTCTCTGGGTGGTAGGGATTTTGATGAGGTTCTGTTCCACCACTTTGCCGCAAAATTTAAGGAGGAGTACAAGATTGACGTATTCCAAAATGCTAGGGCTTGTCTAAGGTTGAGGGCTGCTTGTGAGAAGCTGAAGAAGGTGCTCAGTGCAAATCCTGAGGCACCTTTGAATATTGAGTGCTTAATGGATGAGAAGGATGTCAGGGGCTTTATCAAGCGTGATGAATTTGAGCAACTAAGTTTGCCAATTTTGGAACGTGTGAAGGGACCTTTGGAGAAGGCACTTGCAGAAGCAGGTCTTGATGTTGACAACATACACATGGTTGAGGTGGTTGGTTCTGGTTCTCGTGTACCGGCTGTAAACAAAATATTGACAGAGTTTTTCAAAAAAGAGCCTAGGAGGACAATGAATGCTAGTGAATGTGTTGCGAGGGGTTGTGCATTGCAGTGTGCTATTCTCAGTCCAACATTTAAAGTTCGAGAGTTTCAGGTCAATGAAAGCTTTCCATTCTCAATTTCTCTTTCCTGGAAAGGTTCTGATCCAGATGCACAGGATAGTGGAGCAGATACTAAGCAAAGTGCCCTTGTTTTCCCCAAGGGAAATCCCATACCTAGTGTCAAGGCATTGACATTTTACAGGCTTGGGACCTTTTCTGTTGACGTACAATATGATGATGTGAGTGGACTGCAAGCACCTGCAAAGATCAGCACATATACTATTGGCCCTTTCCAATCCTCCAAAAGTGAAAAGGCAAAAGTTAAAGTGAAAGTTCGTTTGAATCTACATGGAATTGTATCTCTTGAGTCAGCAACTCTCCTGGAAGAGGAAGAAGTTGAGATTCTAGTTTCTAAAGAACCATCAGGAGAAAATACCAAGATGGAAACCGACAAAGCTCTTCCTGATGCTGCTGCACCTCCTACCTCCAATGATGGTGATGTTAATATGCAAGATGATAAGGCAACTGCTGATGAGCCTGTGGCTGAAAATGGCTTCCCTGAGACAGGAGATAAGCCTGTGCAAATGGATACTGATACCAAGGTTGAGGCTCCAAAGAAAAAGGTGAAGAAAACAAACATTCCTGTCACAGAGGTAGTTTATGGAGCAATGTTACTTGTGGATGTCCAGAAAGCTGTAGAGAAGGAATTTGAAATGGCTTTGCAAGATCGAGTGATGGAGGAAACAAAAGACAAAAAGAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGAAAAATACCAAGAGTTTGTCGTTGCTCAAGAGAGGGAAGAGTTTATTGCTAAACTTCAGGGGGTGGAAGACTGGCTATATGAGGATGGTGAAGATGAAACTAAAGGTGTATATGTTGCCAAACTTGAAGAACTCAAGAAGCAAGGTGATCCAATTGAACAACGTTACAAGGAACACACGGAAAGAGGTTCAGTAGTTGATCAACTACTCTATTGTATAAATAGTTACAGAGAAGCTGTAATGTCAAATGATCCCAAATTTGATCACATTGATATCAGTGAGAAAGAGAAGGTCTTGATTGAATGTGTAGAAGCTGAGAACTGGCTTAGGGAGAAGAAGCAGCAACAAGACTCACTTCCAAAATATTCCACTCCTGTACTCTTGTCAGCTGATATAAGAAACAAGGCTGAGGCTATTGATAGGTTCTGTAAGCCGATCATGACAAAACCAAAACCAAAGCCAACCAAGGCTCCGGCTACCCCACCTCCTCAGAGTGATGAACAGCAGCAGCAACCTCAAGAAAATGCAAATGACAGCACTGATGAGAATGCAGGAAACAATGGAAATCAGGTTCCAACAGAGTCAGCTGAACCAATGGAGACTGATAATAAATCAGACAACACAGGCTCTTCATAA 2556 0.4268 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAATTMMNPKNSISQMKRLIGRKFSDPELQQDLKSLPFLVTEGPDGYPLIHSRYLGEARTFTPTQVLGMMFSNLKEIAQKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLLHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSYDRSLGGRDFDEVLFHHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLDVDNIHMVEVVGSGSRVPAVNKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSDPDAQDSGADTKQSALVFPKGNPIPSVKALTFYRLGTFSVDVQYDDVSGLQAPAKISTYTIGPFQSSKSEKAKVKVKVRLNLHGIVSLESATLLEEEEVEILVSKEPSGENTKMETDKALPDAAAPPTSNDGDVNMQDDKATADEPVAENGFPETGDKPVQMDTDTKVEAPKKKVKKTNIPVTEVVYGAMLLVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNEKYQEFVVAQEREEFIAKLQGVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEQRYKEHTERGSVVDQLLYCINSYREAVMSNDPKFDHIDISEKEKVLIECVEAENWLREKKQQQDSLPKYSTPVLLSADIRNKAEAIDRFCKPIMTKPKPKPTKAPATPPPQSDEQQQQPQENANDSTDENAGNNGNQVPTESAEPMETDNKSDNTGSS 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0237 851 MobiDBLite consensus disorder prediction 785 851 - -
Lal8g0237 851 Gene3D - 186 360 - -
Lal8g0237 851 MobiDBLite consensus disorder prediction 802 851 - -
Lal8g0237 851 CDD HSPA4_like_NDB 2 381 - -
Lal8g0237 851 PANTHER HSC70CB, ISOFORM G-RELATED 1 847 - -
Lal8g0237 851 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 847 - -
Lal8g0237 851 Gene3D - 599 706 IPR029048 -
Lal8g0237 851 MobiDBLite consensus disorder prediction 510 544 - -
Lal8g0237 851 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 594 IPR029047 -
Lal8g0237 851 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lal8g0237 851 PRINTS 70kDa heat shock protein signature 2 15 - -
Lal8g0237 851 PRINTS 70kDa heat shock protein signature 30 42 - -
Lal8g0237 851 PRINTS 70kDa heat shock protein signature 140 160 - -
Lal8g0237 851 PRINTS 70kDa heat shock protein signature 332 348 - -
Lal8g0237 851 PRINTS 70kDa heat shock protein signature 363 383 - -
Lal8g0237 851 Gene3D - 38 113 - -
Lal8g0237 851 Gene3D - 5 374 - -
Lal8g0237 851 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 629 IPR029047 -
Lal8g0237 851 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Lal8g0237 851 Gene3D Actin; Chain A, domain 4 230 313 - -
Lal8g0237 851 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 600 696 IPR029048 -
Lal8g0237 851 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 709 796 IPR029048 -
Lal8g0237 851 Pfam Hsp70 protein 3 697 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0237 Lal-Chr8 1598276 1603618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0237 4 406 Calmodulin-binding Proteins AT1G16030 36.453 1.96e-86 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0237 K09489 - gmx:100778196 1397.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0237 8 1598276 1603618 Lal8g0237 8 1598276 1603618 ECH
Lal10g1138 10 18113611 18119072 Lal8g0237 8 1598276 1603618 LSH
Lal8g0237 8 1598276 1603618 Lal20g1191 20 16380667 16386350 PCT
Lal8g0237 8 1598276 1603618 Lal1g1277 1 14145905 14152198 PCT
Lal8g0237 8 1598276 1603618 Lal18g0188 18 1545747 1551351 PCT
Lal20g1191 20 16380667 16386350 Lal8g0237 8 1598276 1603618 PCT
Lal1g1277 1 14145905 14152198 Lal8g0237 8 1598276 1603618 PCT
Lal18g0188 18 1545747 1551351 Lal8g0237 8 1598276 1603618 PCT