Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0236 ATGGATGACATTGAAGATGATGATACAAGGTATCCCTCTAACCCATATAGGGTTAGTCATCACCACCAAGGTTATGATCATATGAGTCATCAGAAACTTCTTATAAATGTTTCTCAATATTCGCAGCCGGGTAAAAATGGATATGGGGGAGATAATCATAACAATGAGGGTGAGGGTGAGGAAGAGGAACCAGAAGAGCAATTAGGAGAGGAAGAAAATGAGGAGGAAGATGATGTTGATGCAAATGGGGATGGTGATGATAATGGCGATGATGATGATGATGGTGGTGAGGAAGATGATGATGATGACGGCGACGATAATCAGAAAAGTTATTTCATGGAGATTGATGATGATTTAGAGTGCCAACCAAAAAGGCAAAAGCTGAAGAGTTTGATTTCGGCTTATGAATTTGCGCCGCGTGTGCCATCACCATCAGCTGTGGCTCCCTCAGCTCCTAAACCATGTTTTGGTGGTAGAAATCCACTTACCGATTGGACTGAGCATGAGACATTCGCCCTTCTTGCTGTATGGGGTGATCGGTTTCTTCAACATGGAAGGAAGAGTCTTCGATCCGAGGAATGGCAAGAAGTTGCAGAAAAGGTCTCAAAAGTTTCCAGGGTTGAAAGGACAGATACTCAGTGTAGAAACCGTCTAGATACACTGAAGAAGAAATACAAAAAGGAGAAGATTAAGTTTCCAGAAATGGATGGTGGAACTAGCAACTGGGTTTACTTTAAAAAGATGGATAAGCTAATGTCTTCTCCACCACAACAACTAGACCCTTCATGTGGTTTGGACTCAGGAGAGTATGTTTATACGAACTCTAGAATTTATTCGAATCGTGCAAATGGGTTGGATGAAATGAGGGTTAGTCCTGAGAATACAGAATCTACTGAAGAAGCTTCAGATGGACCTCATGCAAAGAAAAGAAGAGGAAGGGGTAGCGGAGAAGCTTCTTCGTTCAGATTACTTGCTGATTCCCTTCATAGATTCAGTAACATATATGAGAAGATTGAAAATGATAGAAGGAAACAGATGGTGAAACTAGAAAAGATGAGGGTGGATATTCAAAAGGAAATAGAAACACAGAGACGAGAGATTTTAGAACGATTGCAGAGCGAGATTTCAAAACTAGAGCAGTCAGATGAAGAGAATGATGATTCGTCCGAGAATGGTATGTGA 1182 0.412 MDDIEDDDTRYPSNPYRVSHHHQGYDHMSHQKLLINVSQYSQPGKNGYGGDNHNNEGEGEEEEPEEQLGEEENEEEDDVDANGDGDDNGDDDDDGGEEDDDDDGDDNQKSYFMEIDDDLECQPKRQKLKSLISAYEFAPRVPSPSAVAPSAPKPCFGGRNPLTDWTEHETFALLAVWGDRFLQHGRKSLRSEEWQEVAEKVSKVSRVERTDTQCRNRLDTLKKKYKKEKIKFPEMDGGTSNWVYFKKMDKLMSSPPQQLDPSCGLDSGEYVYTNSRIYSNRANGLDEMRVSPENTESTEEASDGPHAKKRRGRGSGEASSFRLLADSLHRFSNIYEKIENDRRKQMVKLEKMRVDIQKEIETQRREILERLQSEISKLEQSDEENDDSSENGM 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0236 393 MobiDBLite consensus disorder prediction 373 393 - -
Lal8g0236 393 Pfam Myb/SANT-like DNA-binding domain 164 251 IPR044822 -
Lal8g0236 393 MobiDBLite consensus disorder prediction 283 319 - -
Lal8g0236 393 Gene3D - 165 227 - -
Lal8g0236 393 Coils Coil 346 366 - -
Lal8g0236 393 MobiDBLite consensus disorder prediction 1 119 - -
Lal8g0236 393 MobiDBLite consensus disorder prediction 56 107 - -
Lal8g0236 393 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 63 391 IPR044823 -
Lal8g0236 393 MobiDBLite consensus disorder prediction 292 316 - -
Lal8g0236 393 MobiDBLite consensus disorder prediction 32 49 - -
Lal8g0236 393 ProSiteProfiles Myb-like domain profile. 165 222 IPR001005 -
Lal8g0236 393 PANTHER OS01G0718900 PROTEIN 63 391 - -
Lal8g0236 393 MobiDBLite consensus disorder prediction 8 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0236 Lal-Chr8 1596239 1597420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0236 309 380 Trihelix Transcription Factor Family AT3G14180 37.500 3.73e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal8g0236 Myb_DNA-bind_4 5.6e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0236 - - lang:109342851 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0236 8 1596239 1597420 Lal8g0236 8 1596239 1597420 ECH
Lal25g0281 25 1943929 1945540 Lal8g0236 8 1596239 1597420 LSH
Lal10g1140 10 18123871 18126305 Lal8g0236 8 1596239 1597420 LSH