Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0234 ATGGAAATCCACAAGGTTGAGTTGCCACCACATAGAAGCACATTACAGAAACTAAAACAAAGACTCTCTGAAATCTTCTTATCAGATGATCCTTTCTACCCATTTAAGAATCAAACATTCCGAACAAAGTTCATTTTAGGACTTCAATACATTTTCCCTATATTCCTGTGGGCCCCTCAGTATAACTTTCGTCTTCTTCGCTCTGATATCATCTCTGGCCTCACCATTGCTAGTCTTGCCATTCCTCAGGGAATCAATTCAAGTTTTGTGCCCCCATTGATATATTCCATGCTTGGGAGTTCTAAACATCTTGGTGTTGGTCCAATTTCAATTGCATCTATGGTTATGGGGTCAATGTTAAGTGAAATAGTTTCTTTCACTCAATACCCAACTCTTTATCTCAAATTGGCTTTCACTACCACTTTCTTTGCTGGAATATTCCAAGCCTCTCTGGGTATATTAAGGTTAGGCTTTATAATTGATTTTCTATCAAAGGCAACACTGATAGGTTTCATGGCTGGTGTTGCGGTCATTGTTTCACTACAACAGCTGAAAGCATTACTTGGAATAGTGCACTTTACCAACAAGATGCAAATAGTTCCTGTTCTCATCTCTGTTTTCAAGCAAAGACATGAGTGGTCATGGCAAGCCGTTGTACTGGGATCCTGCCTCTTGGTTTTTCTGCTGACAACAAGATACATTAGCTTAAAGAAACCAAAACTGTTCTGGGTTTCAGCAGCTGCCCCATTAACATCAGTTATTCTGTCAACCATTTTAGTCTTCCTTCTCAGAAACAAGACTAATAAAATAGCATTTATTGGGGAGTTACCGAAGGGCATTAATCCACCATCACCAAACTTGTTATACTTCAAAGGTCCTCTCTTGGCTCTTGCTATCAAAACCGGCCTTATCACAGGGATCTTATCTCTCATTGAAGGAATTGCAGTAGGAAGAACATTTGCAGCATTTAACAACTACCAGGTTGATGGAAACAAAGAAATGATAGCTATTGGCGTTATGAACGTAGTTGGTTCTTGTTCTTCATGCTTTGTCACAGCAGGATCCTTTTCTAGATCAGCTGTTAACTATAATGCTGGAGCAAAGTCAACAGTTTCAAATATAGTCATGGCTGCAGCTGTTCTAGTGACTCTTCTGTTTCTCATGCCTCTATTCCATTATACGCCAAATGTTGTCTTAGGAGCCATTATCATCACTGCTGTGATTGGGTTAATAGATTATCAAGCTGTGGTTAAACTGTGGAAGGTTGACAAACTTGATTGCCTGGCATGTATGTGTTCCTTTTTTGGGGTTTTGTTCATTTCAGTACCTGTAGGCCTTAGTATCGCGGTTGGAATATCAGTCTTCAAGATATTGCTTCATGTGTCTAGACCAAACACTTTGGTTTTGGGAAATATATCAGGAACAAACATATTCCATAATGTTAAACAATACAAAGAAGCTTTAAAAATCCCTTCATTTCTCATTTTAGGAATTGAATCTCCAATCTTTTTTGCTAATTCAAATTACCTTCAAGAAAGGATACTGAGATGGGTTAGAGAAGAGGAAGAACTTATAATAGCAAACAATGGAAGTTCATTAAGATGCATAATTTTAGACATGACAGCTGTCACAGCCATAGACACAAGTGGACTTGACACTTTATGTGAACTTAAAAAGATGCTGGAGAAAAGATTACTCCAGCTTGTGTTGGCAAATCCTGTTGGAAATGTGACAGAAAAGTTACACCAGTCAAAAATTTTGGAGAACTTTGGATTGAAGGGAGTCTATCTCACAGTGGGAGAAGCTGTGACTGACATTTCTTCATCTTGGAAACCTCAGCCCTGA 1845 0.387 MEIHKVELPPHRSTLQKLKQRLSEIFLSDDPFYPFKNQTFRTKFILGLQYIFPIFLWAPQYNFRLLRSDIISGLTIASLAIPQGINSSFVPPLIYSMLGSSKHLGVGPISIASMVMGSMLSEIVSFTQYPTLYLKLAFTTTFFAGIFQASLGILRLGFIIDFLSKATLIGFMAGVAVIVSLQQLKALLGIVHFTNKMQIVPVLISVFKQRHEWSWQAVVLGSCLLVFLLTTRYISLKKPKLFWVSAAAPLTSVILSTILVFLLRNKTNKIAFIGELPKGINPPSPNLLYFKGPLLALAIKTGLITGILSLIEGIAVGRTFAAFNNYQVDGNKEMIAIGVMNVVGSCSSCFVTAGSFSRSAVNYNAGAKSTVSNIVMAAAVLVTLLFLMPLFHYTPNVVLGAIIITAVIGLIDYQAVVKLWKVDKLDCLACMCSFFGVLFISVPVGLSIAVGISVFKILLHVSRPNTLVLGNISGTNIFHNVKQYKEALKIPSFLILGIESPIFFANSNYLQERILRWVREEEELIIANNGSSLRCIILDMTAVTAIDTSGLDTLCELKKMLEKRLLQLVLANPVGNVTEKLHQSKILENFGLKGVYLTVGEAVTDISSSWKPQP 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0234 614 CDD STAS_SulP_like_sulfate_transporter 484 599 - -
Lal8g0234 614 Pfam STAS domain 484 602 IPR002645 -
Lal8g0234 614 Pfam Sulfate permease family 66 432 IPR011547 GO:0016021
Lal8g0234 614 Gene3D STAS domain 463 608 IPR036513 -
Lal8g0234 614 SUPERFAMILY SpoIIaa-like 488 604 IPR036513 -
Lal8g0234 614 PANTHER SLC26A/SULP TRANSPORTER-RELATED 1 614 - -
Lal8g0234 614 PANTHER SULFATE TRANSPORTER 1 614 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal8g0234 614 ProSiteProfiles STAS domain profile. 483 606 IPR002645 -
Lal8g0234 614 TIGRFAM sulP: sulfate permease 53 602 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0234 Lal-Chr8 1585033 1590934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0234 1 614 Inorganic Solute Cotransporters AT3G15990 70.317 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0234 K17471 - gmx:100812617 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0234 8 1585033 1590934 Lal8g0234 8 1585033 1590934 ECH
Lal10g1142 10 18132022 18137035 Lal8g0234 8 1585033 1590934 LSH
Lal8g0234 8 1585033 1590934 Lal1g1274 1 14124886 14132018 PCT
Lal8g0234 8 1585033 1590934 Lal18g0190 18 1560631 1565544 PCT
Lal1g1274 1 14124886 14132018 Lal8g0234 8 1585033 1590934 PCT
Lal18g0190 18 1560631 1565544 Lal8g0234 8 1585033 1590934 PCT