Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0230 ATGGGTGGTAGTTGCTTGTGTAATTATGCGCATTTGTCATTAACTATGTCACTTAAGAAAGTGGTAGCAAGCCTTAAGGCTCCATTTGTAATGGTGGTGGTACAAGTTGCTTATGCTGGTGTTAGCATCTTGTACAAATTGGTTGCAAAAGATGGCATGAACCTTAGTATTCTTATGGCTTATCGCTTTCTCTTTGCATCTGCTTTCATTGTTCCTCTAGCCTTTTTAGTTGAAAGGAAGAGCAAGCCAAGGATCACACCAAGAGTACTCTTTCAAGCATTTCTTTGTGGATTATTTGGGGCAACTATACAACAAAATTTGTTCGTAGAAGCAGTGGCTTTGGCAAATGCAACATATGCTACGGCAATGTACAACCTCATTCCTGGTGTCACCTTCATCTTAGCCTTCTGTTTTGGGTTGGAAAGATTAAACATCAGAAAAATAACAGGGAAGGCCAAGGTTGCTGGCACTATGATTGGAATTTGTGGAGCCATGATCCTGGCCTTCTATAAGAGCACTGAGATTCATCTCTGGTCAACACATATAAACCTTATGCCACATATACAACAACATGATGTGGCTGATACTCAAATTTGGGGATCTTTTCTTGCTTTTGGAACTTGTCTTTCATATTCAATTTGGTTGATAATTCAGGCAAGGATGAGTGAGAAGTTTCCTTGGCATTATACAAGTGCAGCTTTGATGTCAGTGATGGCTTCCATTCAATCAGTTATATTTGCCCTCTGCATGGAAAGAGATTGGAATCAATGGAAGCTTGCCTGGAATATCAGACTTCTCACTGCACTTTATTCGGGTGTTGTGGCCTCTGGACTTGTTTGGGTTCTAATTATGTGGTGTGTACACTTAAAAGGTCCACTTTATGCTTCAAGTTTCAATCCACTCTTCCTTGTTCTAGTGGCCATTGCAGGGTCTCTTATATTAGATGAAAAGCTATATTTGGGAAGCATAATAGGATCAGTATTAATTATTGTCGGGCTATACTCTGTCTTGTGGGGGAAAGGTAAAGAATTGAAGGAATCCAAGAGGTAA 1050 0.4 MGGSCLCNYAHLSLTMSLKKVVASLKAPFVMVVVQVAYAGVSILYKLVAKDGMNLSILMAYRFLFASAFIVPLAFLVERKSKPRITPRVLFQAFLCGLFGATIQQNLFVEAVALANATYATAMYNLIPGVTFILAFCFGLERLNIRKITGKAKVAGTMIGICGAMILAFYKSTEIHLWSTHINLMPHIQQHDVADTQIWGSFLAFGTCLSYSIWLIIQARMSEKFPWHYTSAALMSVMASIQSVIFALCMERDWNQWKLAWNIRLLTALYSGVVASGLVWVLIMWCVHLKGPLYASSFNPLFLVLVAIAGSLILDEKLYLGSIIGSVLIIVGLYSVLWGKGKELKESKR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0230 349 Pfam EamA-like transporter family 29 167 IPR000620 GO:0016020|GO:0016021
Lal8g0230 349 Pfam EamA-like transporter family 199 337 IPR000620 GO:0016020|GO:0016021
Lal8g0230 349 PANTHER WAT1-RELATED PROTEIN 25 347 - -
Lal8g0230 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 61 169 - -
Lal8g0230 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 341 - -
Lal8g0230 349 PANTHER WAT1-RELATED PROTEIN 25 347 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0230 Lal-Chr8 1549034 1558832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0230 25 347 Nodulin-like Gene Family AT1G25270 41.411 7.03e-91 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0230 - - aprc:113856022 497.278