Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0224 ATGGAAAAGGTTGTTGTGGGCTGTGGGCCCATTCCGTTACCAGCAACAACGATCTCAAAAATAATAAAACCCAAACCAACCGTTACCTGGCAGAATCTTGAAGGGACCGTTTCGTCAATTCACTTTCCCTCCACCCTCTCTTCATATTCGCCGCCGTCAAAAGCACTTCTCCTTCCTTCAACGTTCAATTCAAACACCACACACTCCGCATTCAAAGAAGGTTCTAGAAACAATTTTCATGAACTTGAAGCTGAAATTGAAATTGAAACAAAAATGAGTGGAGCTTTAGCAGGGTTACAAGATCACCTCAAATTAGCTAGAGAATACGCTCTTGAAGGACTCTACGATACTTCTATCATCTTCTTCGATGGTGCTATTGCACAGATCAACAAGCACCTAAACAGTGTTGATGATCCGGTAATCCGTACGAAATGGATGAACGTGAAGAAAGCACTTTCTGAAGAAACAGAAGTAGTGAAGCAATTAGATGCGGAGAGAAGGGCATTTAAGGAAACTCCAACTGCGAATTCAAGAAGGTCTCATTCACCAACTATATCAGTTTCTTCTGCTAAATCTAACTTTGTATTTCAGCCGTTGGATGAGTACCCTACTTCATCATCATCATCATCATCGGGACGCGGTGGTGGTTTTACTAATCCGATTCACGATCCCGATGTGTGGAGGCCGCCGAGTCCTCGTGATGCTTCTAGAAGACCACAGGCTGCAAGGAGTGTGAAGAAAGATGGTATGTGGGCGCGTGGGGCTACTACCAGAACAACAGCAACCGGTGCCGTGACAAATGCTAATGCTCGTGGTGGTGCGAGGACTGGTAGGGCTAACTCTGGAACGCGAGGATCGACTGTTGCGAAGAAAGGGAATGCTTCTGTAAAGTCTAGTAAGACCGATTCAGTTAATGGGGATGGTGATGATGGGAAATCAAAGAGGGCACAATATGAAGGTCCTGATCCTGACTTGGCTGAAATGCTTGAAAGAGATGTATTAGAAACCTCTCCTGGAATCAGGTGGGATGATGTTGCTGGCCTCAATGAAGCCAAAAGGCTTCTAGAAGAAGCTGTTGTGCTTCCGCTATGGATGCCTGAGTATTTCCAGGGAATTAGGAGACCGTGGAAAGGTGTTCTCATGTTTGGTCCTCCGGGAACTGGGAAGACACTTCTTGCTAAAGCTGTTGCTACTGAATGTGGTACCACTTTCTTTAATGTTTCTTCTGCTACTTTAGCTTCTAAATGGCGTGGAGAGAGTGAACGCATGGTACGGTGTTTGTTTGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTATGCAATGCTAGAGGGGCTTCTGGGGAGCATGAATCATCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGACGGTGTAAATAATACTTCCACAAATGAAGATGGTAGCCGTAAAATAGTAATGGTTTTGGCAGCCACTAACTTCCCATGGGACATAGACGAGGCACTGAGGTCTGTATTTGCTTCTCTGATTCTTTTCTTTTTAGTTATAAGTAATAATTACAGAAGAAGGCTGGAAAAGCGTATATATATTCCTCTTCCAAATTTTGAGAGTCGTAAAGAGCTGATCCGTATCAATTTGAAGACTGTGGCCACTGACGTTGATATAGATGATGTGGCTCGCCGAACAGAGGGCTATAGTGGAGACGATCTAACTAATGTCTGTCGTGATGCTTCCTTGAATGGTATGAGGCGTAAGATAGCGGGAAAGACTCGTGATGAGATCAAGAACATGCCGAAAGATGAGATTTCAAATGATCCTGTTGCCATGTGTGATTTTGAAGAAGCTTTGAAGAAAGTCCAAAGAAGTGTTTCTCAGACTGACATTGATCGCCATGAGAAATGGTTTCATGAATTTGGATCAGCATAG 1932 0.4374 MEKVVVGCGPIPLPATTISKIIKPKPTVTWQNLEGTVSSIHFPSTLSSYSPPSKALLLPSTFNSNTTHSAFKEGSRNNFHELEAEIEIETKMSGALAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNSVDDPVIRTKWMNVKKALSEETEVVKQLDAERRAFKETPTANSRRSHSPTISVSSAKSNFVFQPLDEYPTSSSSSSSGRGGGFTNPIHDPDVWRPPSPRDASRRPQAARSVKKDGMWARGATTRTTATGAVTNANARGGARTGRANSGTRGSTVAKKGNASVKSSKTDSVNGDGDDGKSKRAQYEGPDPDLAEMLERDVLETSPGIRWDDVAGLNEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVNNTSTNEDGSRKIVMVLAATNFPWDIDEALRSVFASLILFFLVISNNYRRRLEKRIYIPLPNFESRKELIRINLKTVATDVDIDDVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMPKDEISNDPVAMCDFEEALKKVQRSVSQTDIDRHEKWFHEFGSA 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0224 643 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 97 643 IPR028596 GO:0008017|GO:0008568|GO:0051013
Lal8g0224 643 Pfam AAA+ lid domain 554 595 IPR041569 -
Lal8g0224 643 MobiDBLite consensus disorder prediction 255 302 - -
Lal8g0224 643 PANTHER AAA DOMAIN-CONTAINING 93 643 - -
Lal8g0224 643 MobiDBLite consensus disorder prediction 199 216 - -
Lal8g0224 643 SMART AAA_5 375 519 IPR003593 -
Lal8g0224 643 MobiDBLite consensus disorder prediction 199 324 - -
Lal8g0224 643 Pfam ATPase family associated with various cellular activities (AAA) 379 512 IPR003959 GO:0005524|GO:0016887
Lal8g0224 643 Gene3D - 337 633 IPR027417 -
Lal8g0224 643 CDD AAA 373 534 - -
Lal8g0224 643 Gene3D - 92 170 - -
Lal8g0224 643 Gene3D - 535 619 - -
Lal8g0224 643 MobiDBLite consensus disorder prediction 303 324 - -
Lal8g0224 643 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 93 643 - -
Lal8g0224 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 339 640 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0224 Lal-Chr8 1503926 1509789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0224 331 635 Calmodulin-binding Proteins AT3G56690 37.942 2.50e-46 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0224 K07767 - rcu:8271350 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0224 8 1503926 1509789 Lal8g0224 8 1503926 1509789 ECH
Lal25g0271 25 1862111 1866019 Lal8g0224 8 1503926 1509789 LSH
Lal10g1151 10 18201211 18205127 Lal8g0224 8 1503926 1509789 LSH