Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0204 ATGAGCTTCTATCTTCATCTATTGCTACTTGAACTCCTATGTTTCACGTTCATTTTGCCACATGCAGTGTCATTCACTGTTATTATGTCTGGTTCAGGTGTGCCATCAGCACTAGTAGATGGCCCACAACTTGGGTTTTCCATGAACCAAGATGGGGCAAGAACTGATCCTAAGGAACAAGAAGCTGTGTATGATATCATGAGAGCCACCGGAAATGATTGGGCCACTCAAATTCCAGATGTGTGTCGTGGACGTTGGCATGGCATTGAGTGTATGCCTGACAACAACAATGTTTACCATGTTGTCTCTCTTTCTTTTGGGGCCTTATCTGATGATACTGCTTTTCCCACGTGTGACCCGCCCCGATCTTTCATTTCACCTTCTATCACAAATCTCCCACACCTAAAGACTTTGTTTTTTTATCGTTGTTTCATTGATAACCCACAAAAAATTCCACCCTTCTTGGGTCGTCTAGGACCCACATTGCAAACGTTGGTGCTGAGAGAAAATGGTCATGTGGGCTCCATCCCTAACGAATTGGGGAACCTCACTCGTTTGAGGGTCCTTGATCTTCACAAAAACAACATCAACGATTCTATACCGGTTTCATTGGGTCGGATCATCGGTTTAAAGTCGTTGGATTTGAGTGGCAACAAACTAATTGGTTCGATACCTAATTTAAGCTTTGCAGGTTTGAACATATTGGACTTGAGCCAGAATCTTCTAACGGGCCCAATCCCTTCTGCCTTTTGGGCCCATGAATCTCTCATCAAGTTAGATTTCAGTCACAACCGACTTGTGGGACCAATCCCCGAGAAAATCATGGGCCTGAAAGATCTTATGCTTATGGATTTGAGCTACAACCGTATCCAGGGCCCATTTCCAATGTCACTTAGAAGCCTGAGTTCTCTTCAGGCTCTGATCCTCAAAGGAAACCCAATGGGCTCAACAATGATACCAAGTGATGGGTTTGATGGCATGAAGGGCCTAATGATATTAGTTTTATCAAGCATGAATTTGCATGGTCCTATCCCTGAATCACTGAGCACATTACCAAATCTTCGTGTGCTTCATCTAGATGGGAACCATCTTAATGGTTCAATCCCAAAAAGCTTCAAAGATTTGAAAAACCTTAGTGAATTGAGGCTTAATGATAATAAGCTTAGTGGGTCAGTTCCATTTGTGAGAGAAATGGTTTGGAGAATGAAAAGGAAGCTAAGGATATATAACAATTCAGGACTTTGTTATGATGATACTAATAGTGTGGATCCCACGTTTGATTTGAGTATTGGTTTATGTGACACTACTTCAAGTCCAGGTTCCTTTAGGACAGTACAACATGTTTCAACCACTGAAAAACCCATGCCACCAACAACAATGAATGTCTCATCGGATGCTACACTTTCAATGTTGTCATTTGGTCTAGCTACTTTTATAGTGTTTACTTTAATTTTATTGTTGGCAATGAATAACACAAACAATGTAACACTTGATGTTATTCCTAATGGGATAGGAATTTCTGAGACTGGTCTGTGTAAGAATACTAGTTTTGGAATTTGCAAAGCACGAGAGAAGAAACAACCTCCATGGCGGGTATTTTCCTTGAAGGAACTACACTCAGCTACAAATAATTTCAACTATGATAACAAGCTTGGGGAAGGTGGATTCGGAAGTGTCTATTGGGGGCAGCTTTGGGATGGGTCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGTAACAGAGCAGACATGGAGTTTGCTGTTGAAGTTGAGATATTAGCAAGAGTACGGCACAAGAATCTTCTTACTCTACGTGGCTATTGTGCTGAAGGTCAGGAACGGTTAATTGTATATGACTATATGCCAAATATGAGCATACTCTCTCATCTCCATGGACAACACTCCACAGAAAGCCTTCTTGATTGGAATCGAAGATTGAATATTGCAATTGGTTCTGCTGAGGGAATTGCATATCTTCACCACCAAGCGACTCCACATATCATTCACAGAGATATCAAAGCAAGCAATGTGTTATTGGACTCCGATTTCCAGGCACGGGTTGCTGATTTTGGTTTTGCCAGGTTGATCCCTGATGGGGCAACCCATGTTACTACTAGAGTTAAGGGTACCCTTGGCTACCTTGCACCAGAATATGCTATGTTGGGTAAAGCAAATGAGAGCTGTGATGTCTACAGTCTTGGTATTCTCCTTCTAGAACTTGCTACCGGCAGAAAGCCACTCGAAAAACTTAGTTCATCACAGAGGCGATCAATACACGATTGGGCACTGCCCTTGGCTTGTGAGAAGAAATTTAGTGAACTTGCTGATCCAGGACTTAATGGTAACTATGTGGAGGAAGAGCTTAAAAGAGTTGTTTTACTTGCAATCTTATGTACTCAGAGTCAACCCGAGAAGAGACCAACTATGCTTGAGGTGGTGCAACTACTGAAGGGAGAATGCGGAGATAAGATTTATCAGCTGGAGAATAATGATCTGTTTAAAAATCCTGCAGCTTATGGACATTGTGATGGATCAACCACTGCTGAAGGCAGTTCAGACTTTATTTCAGAAGAAACATAA 2580 0.4174 MSFYLHLLLLELLCFTFILPHAVSFTVIMSGSGVPSALVDGPQLGFSMNQDGARTDPKEQEAVYDIMRATGNDWATQIPDVCRGRWHGIECMPDNNNVYHVVSLSFGALSDDTAFPTCDPPRSFISPSITNLPHLKTLFFYRCFIDNPQKIPPFLGRLGPTLQTLVLRENGHVGSIPNELGNLTRLRVLDLHKNNINDSIPVSLGRIIGLKSLDLSGNKLIGSIPNLSFAGLNILDLSQNLLTGPIPSAFWAHESLIKLDFSHNRLVGPIPEKIMGLKDLMLMDLSYNRIQGPFPMSLRSLSSLQALILKGNPMGSTMIPSDGFDGMKGLMILVLSSMNLHGPIPESLSTLPNLRVLHLDGNHLNGSIPKSFKDLKNLSELRLNDNKLSGSVPFVREMVWRMKRKLRIYNNSGLCYDDTNSVDPTFDLSIGLCDTTSSPGSFRTVQHVSTTEKPMPPTTMNVSSDATLSMLSFGLATFIVFTLILLLAMNNTNNVTLDVIPNGIGISETGLCKNTSFGICKAREKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNRADMEFAVEVEILARVRHKNLLTLRGYCAEGQERLIVYDYMPNMSILSHLHGQHSTESLLDWNRRLNIAIGSAEGIAYLHHQATPHIIHRDIKASNVLLDSDFQARVADFGFARLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSLGILLLELATGRKPLEKLSSSQRRSIHDWALPLACEKKFSELADPGLNGNYVEEELKRVVLLAILCTQSQPEKRPTMLEVVQLLKGECGDKIYQLENNDLFKNPAAYGHCDGSTTAEGSSDFISEET 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0204 859 ProSiteProfiles Protein kinase domain profile. 545 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0204 859 SUPERFAMILY L domain-like 73 418 - -
Lal8g0204 859 Gene3D Transferase(Phosphotransferase) domain 1 621 831 - -
Lal8g0204 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 667 679 IPR008271 GO:0004672|GO:0006468
Lal8g0204 859 SUPERFAMILY Protein kinase-like (PK-like) 528 816 IPR011009 -
Lal8g0204 859 ProSiteProfiles Leucine-rich repeat profile. 209 231 IPR001611 GO:0005515
Lal8g0204 859 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 393 - -
Lal8g0204 859 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 125 818 - -
Lal8g0204 859 Gene3D Ribonuclease Inhibitor 230 319 IPR032675 -
Lal8g0204 859 Gene3D Ribonuclease Inhibitor 320 421 IPR032675 -
Lal8g0204 859 Gene3D Ribonuclease Inhibitor 59 229 IPR032675 -
Lal8g0204 859 Pfam Protein kinase domain 546 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0204 859 SMART LRR_typ_2 301 326 IPR003591 -
Lal8g0204 859 SMART LRR_typ_2 208 231 IPR003591 -
Lal8g0204 859 SMART LRR_typ_2 351 374 IPR003591 -
Lal8g0204 859 SMART LRR_typ_2 375 398 IPR003591 -
Lal8g0204 859 SMART LRR_typ_2 183 207 IPR003591 -
Lal8g0204 859 Pfam Leucine rich repeat 317 364 IPR001611 GO:0005515
Lal8g0204 859 Pfam Leucine rich repeat 209 266 IPR001611 GO:0005515
Lal8g0204 859 ProSitePatterns Protein kinases ATP-binding region signature. 551 573 IPR017441 GO:0005524
Lal8g0204 859 Gene3D Phosphorylase Kinase; domain 1 512 620 - -
Lal8g0204 859 SMART serkin_6 545 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0204 859 CDD STKc_IRAK 551 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0204 Lal-Chr8 1373865 1379944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0204 161 817 Receptor kinase-like Gene Family AT5G07280 34.069 1.51e-101 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lal8g0204 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0204 - - gmx:100803490 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0204 8 1373865 1379944 Lal8g0204 8 1373865 1379944 ECH
Lal8g0204 8 1373865 1379944 Lal20g1221 20 16693009 16698686 PCT
Lal8g0204 8 1373865 1379944 Lal1g1249 1 13763718 13769434 PCT
Lal20g1221 20 16693009 16698686 Lal8g0204 8 1373865 1379944 PCT
Lal1g1249 1 13763718 13769434 Lal8g0204 8 1373865 1379944 PCT