Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0191 ATGCTTCTTCATCATCAAGCACCCGAATCACTGAACTTCATCAAGTTCCTCTCTTCACCACCACCACCACCACCACCACCACCACCATCACCACCATTACCACCATCACCATGTCATCCTCAAACCAATGAAATGACACTCGAAGGAATCGCTGCCATTGTTGGGCAACAAGTCCTTTTCGGAGGCAAAAACGACAACCTCAAAACGACAACTAAAAATACCAAAGAAGTGAAAACAAATCTCAGTGTGGGTAAGAGATACAGAGGAGTAAGGAAGAGGCCGTGGGGAAGGTGGTCTGCGGAGATACGAGACCGTATCGGTCGGTGCCGCCACTGGCTAGGAACATTTGACACAGCGGAGGAGGCAGCGCGTGCTTATGACGCAGCAGCGAGGCGATTGAGAGGTTCCAAAGCTCGAACCAACTTCGAGATACCGTCTGTGTTTCCGCCGTCATCGTCGTCTTCATCCACGGAAGAGAAAACGGCGACACGTAAGCCAAAAGGGACACGTGGAATTACTGAGAGGAAGTGCTGTGTGGTTACCTCTGTATCTCAATTGTTCAGTAATGGGGTTCCTCGAGTTGCAAGAAATAATGGAATATTTATGGGGCAATGCATGGGAATAGGGCTTATCATGGTGCTTACTTTTGGATCAACCTGTGTACTCATTTGTAGAGAAAACAAGAGATCAAAACATGGGGAAAAAGGAGTAATCAATGTTGTGGAAGTGTAA 732 0.4754 MLLHHQAPESLNFIKFLSSPPPPPPPPPPSPPLPPSPCHPQTNEMTLEGIAAIVGQQVLFGGKNDNLKTTTKNTKEVKTNLSVGKRYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEIPSVFPPSSSSSSTEEKTATRKPKGTRGITERKCCVVTSVSQLFSNGVPRVARNNGIFMGQCMGIGLIMVLTFGSTCVLICRENKRSKHGEKGVINVVEV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0191 243 MobiDBLite consensus disorder prediction 145 159 - -
Lal8g0191 243 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
Lal8g0191 243 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 41 192 - -
Lal8g0191 243 MobiDBLite consensus disorder prediction 17 39 - -
Lal8g0191 243 MobiDBLite consensus disorder prediction 14 39 - -
Lal8g0191 243 MobiDBLite consensus disorder prediction 143 169 - -
Lal8g0191 243 SUPERFAMILY DNA-binding domain 86 143 IPR016177 GO:0003677
Lal8g0191 243 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 41 192 - -
Lal8g0191 243 SMART rav1_2 86 149 IPR001471 GO:0003700|GO:0006355
Lal8g0191 243 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Lal8g0191 243 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Lal8g0191 243 ProSiteProfiles AP2/ERF domain profile. 86 143 IPR001471 GO:0003700|GO:0006355
Lal8g0191 243 Gene3D AP2/ERF domain 85 144 IPR036955 GO:0003700|GO:0006355
Lal8g0191 243 SUPERFAMILY Formin homology 2 domain (FH2 domain) 21 29 - -
Lal8g0191 243 CDD AP2 85 144 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0191 Lal-Chr8 1277504 1278676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0191 35 190 AP2-EREBP Transcription Factor Family AT1G80580 54.321 5.36e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal8g0191 AP2 2.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0191 - - cam:101490906 163.696