Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0190 ATGAATCTCCTTCTTTTGTTCTTCCCCATTTTGATGCTAACACTTTCTCTTTCTTCATCAAATCTTCATGCTTCAAATGCAAATGCAAATGCACAAGCTCAATCTCCAGGAATTCAGGAGGCCAGAGTAGTGCACCACCAGAATTTGAATAAGAGAATTCTAGTAGCACTAATTGTTAGTTGTGTTCTTCTTGGTGGAATCTTCCTATTCTTATCATGTGTCTGGTTCGGTCGACATAAAATATTAAGAGGCCCAAGCCGCAAAAGCGAAGGAACCATGGAGGCTGCAAAGGGGGAAACCTTAAACCCTGTTAGTGCTAAACTGAACTACTCAAAGATGACAGATAAGAAGAGTTCAGTTGCTATTTTTGACTTTCAATTGTTAGAGGCTGCAACAAACAGCTTTTGCAAAAGCAACATTATGGGAGAGAGTGGTTCTGGAATTGTTTACAGAGCTCGTTTCGAGGAACATTTCAAGGCAGCTGTGAAGATAGCAGATAGTGACGCTGATAGAGAATTTGAGAATGAAGTGAGTTGGTTGAGCAAGATGCGGCATCAGAATATCATAAAACTTCTTGGTTATTGCATTCATGGTGAATCGAGGTTTCTTGTTTATGAATTGATGGAGAATGGATCTTTGGAAACTCAATTGCATGGACCTAATCGTGGATCGTCTTTAACTTGGTTTCTCCGGTTAAGGATTGCAGTTGATGTTGCTAGGGCGTTAGAATATCTCCATGAGCACTCCAATCCTCCCGTGGTTCATAGAGACGTAAAATCTTCTAATGTTCTTCTGGATTCTAACTTCAATGCCAAGTTATCAGATTTCGGACTTGCTATAGGCTCTGGAATGCAACACAAGAACATGAAGATGTCAGGAACTTTGGGTTATGTGGCACCTGAGTACATATCACATGGTAAACTAACTGATAAGAGTGATGTCTACGCATTTGGGGTTGTCCTTCTAGAACTTCTAACTGGAAGAAAACCCATGGAGAACATGTCCTCAAACGAATACCAATCCCTTATCTCATGGGCTATGCCTCAGCTAACTGACAGATCAAAACTTCCAAGTATTCTGGATCCTGCTATCAGAAACACAATGGATTTGAAGCATTTATATCAGGTTGCAGCAGTGGCTGTGCTCTGTGTGCAATCAGAACCAAGTTATAGGCCACTAATAACAGATGTGCTACACTCCCTCATTCCTTTAGTACCTGTTGAGCTTGGAGGGTCACTCAGAGTTACAGAACCAGTTCACTCAGAGGACTTGCACTGA 1278 0.4131 MNLLLLFFPILMLTLSLSSSNLHASNANANAQAQSPGIQEARVVHHQNLNKRILVALIVSCVLLGGIFLFLSCVWFGRHKILRGPSRKSEGTMEAAKGETLNPVSAKLNYSKMTDKKSSVAIFDFQLLEAATNSFCKSNIMGESGSGIVYRARFEEHFKAAVKIADSDADREFENEVSWLSKMRHQNIIKLLGYCIHGESRFLVYELMENGSLETQLHGPNRGSSLTWFLRLRIAVDVARALEYLHEHSNPPVVHRDVKSSNVLLDSNFNAKLSDFGLAIGSGMQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKPMENMSSNEYQSLISWAMPQLTDRSKLPSILDPAIRNTMDLKHLYQVAAVAVLCVQSEPSYRPLITDVLHSLIPLVPVELGGSLRVTEPVHSEDLH 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0190 425 SUPERFAMILY Protein kinase-like (PK-like) 110 401 IPR011009 -
Lal8g0190 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Lal8g0190 425 PANTHER OS01G0750732 PROTEIN 20 422 - -
Lal8g0190 425 Gene3D Transferase(Phosphotransferase) domain 1 208 406 - -
Lal8g0190 425 Gene3D Phosphorylase Kinase; domain 1 97 207 - -
Lal8g0190 425 PANTHER BNAC02G46490D PROTEIN 20 422 - -
Lal8g0190 425 SMART serkin_6 135 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0190 425 ProSiteProfiles Protein kinase domain profile. 135 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0190 425 Pfam Protein tyrosine and serine/threonine kinase 140 346 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0190 Lal-Chr8 1266986 1270643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0190 15 347 Receptor kinase-like Gene Family AT1G80640 46.921 9.88e-101 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lal8g0190 PK_Tyr_Ser-Thr 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0190 - - gmx:100811188 678.707