Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0189 ATGACAACCCTAGAAGATATAAAGAAGGAGACAGTGGATCTTGAGAGAATACCTGTTGATGAAGTGTTCAAAGAATTGAACTGTTCCAAGGAAGGACTCACCAATGATGAAGGCCAAAAGAGGTTGCTAGTTTTTGGACCCAACAAGTTGGAAGAAAAGAAGGCAATCATTCAACCCCAGGATCTGGCTTCCACATTAGAAAGCAAGTTGCTCAAATTCTTGGGCTTTATGTGGAACCCGCTTTCATGGGTCATGGAACTCGGTGCTATCATGGCCATTGCATTGGCAAATGGAGGGGGTAAGCCACCAGATTGGCAGGATTTTGTTGGAATAACTGTGCTGCTAGTTATCAACTCCACTATTAGCTTTATAGAAGAAAACAATGCAGGCAATGCAGCTGCAGCACTTATGGCTGGTCTTGCTCCCAAAACCAAGCAAGGAGAGATTGAGGCTATTGTAATTGCAACTGGAGTTCATACTTTCTTTGGTAAAGCTGCTCACTTGGTAGATAGCACTAACCAAGTTGGTCACTTCCAAAAGGCCAGAGATGGCATTACAGAGGTACATTTCCTGCCCTTTAATCCAGTGGACAAGCGTACAGCCATAACATACATAGACACTACAGGTAATTGGCATCGAGCTAGCAAAGGAGCACCAGAGCAGATTATAGAACTTTGCAATCTCAAGGAAGAGGTGAAGAGGAAAGCTCTTTCCATTATTGATAAATTTGCTGAACGTGGTCTTCGTTCCCTTGCTGTTGCCAAACAAGAAGTGCCAGAAAAGAGCAAGGAGAGTGCAGGAGCAGCATGGCAATTTGTTGGTCTGTTGCCTCTGTTTGATCCACCAAGGCATGACAGTGCAGAGACGATTAGGCGCGCTCTCCATCTAGGAGTGAATGTTAAGATGATTACTGGTGATCAGCTAGCTATTGGAAAGGAAACTGGTAGAAGGCTTGGCATGGGAAGTAATATGTACCCTTCTTCATCCCTCCTTGGCCAGAACAAAGATGAGTCTGTTGCTTCTCTTCCAATTGATGAACTTATTGAGAAGGCTGATGGCTTTGCTGGTGTCTTCCCTGAACACAAATATGAGATTGTGAAGAGACTCCAAGACAGGAAACACATATGTGGGATGACTGGTGATGGTGTGAATGATGCTCCTGCCTTGAAAAGGGCAGATATTGGAATTGCAGTGGCTGATGCAACCGATGCAGCTCGAGGTGCATCTGACATAGTCCTCACTGAGCCTGGTTTGAGTGTCATTGTGAGTGCAGTCTTGACAAGTAGAGCCATCTTTCAGAGGATGAAGAACTACACCATATATGCAGTTTCTATAACAATCCGAATTGTGCTTGGCTTTTTGCTCATTGCTCTAATATGGAAATTTGATTTTTCACCTTTTATGGTTTTGATCATTGCCATACTAAATGATGGCACCATCATGACCATTTCCAAGGATAGGGTGAAGCCATCTCCCTCACCTGATTCATGGAAGCTGAGAGAGATTTTCACCACAGGAGTAGTGCTTGGTGCCTACCTTGCTGTTATGACTGTTGTCTTTTTCTGGGCTGCTCATGCATCTAATTTCTTCTCGGACAAATTTGGTGTGAGATCCATCAGGGACAATGAGCATGAGCTCACAGCAGCTGTTTATCTTCAAGTGAGTATTGTAAGCCAGGCTCTCATTTTTGTTACAAGGTCAAGGAGCTGGTCTTACGCCGAACGACCTGGCTTACTTTTGATGGTTGCATTTTTGATAGCACAACTGATTGCAACAATCATAGCTGTGTATGCAAACTGGGGCTTTGCAAGGATCAAAGGAATTGGTTGGGGTTGGGCTGGTGTCATTTGGCTCTACAGCATTATTTTCTATATACCCTTGGATATTCTTAAATTCATCATCAGATATGCCTTGAGTGGCAAGGCATGGAATAACGTTACCGAGAACAGGATTGCTTTCACCTCAAAGAAGGATTATGGAAAAGGGGAGAGAGAAGCACAATGGGCTACAGCTCAACGCACACTACATGGTCTCAATCCTCCTGAAACTGATGAAATGTTGAATGAAAAGAACAACTATAGGGAATTGTCTGAACTTGCAGAACAGGCTAAGAAACGTGCTGAAGTTGCAAGGTTGAGGGAGCTTCACACACTGAAGGGACATGTAGAGTCTGTTGTGAAACTCAAGGGGCTTGACATTGACACAATTCAACAACACTACACTGTCTAG 2229 0.4388 MTTLEDIKKETVDLERIPVDEVFKELNCSKEGLTNDEGQKRLLVFGPNKLEEKKAIIQPQDLASTLESKLLKFLGFMWNPLSWVMELGAIMAIALANGGGKPPDWQDFVGITVLLVINSTISFIEENNAGNAAAALMAGLAPKTKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKARDGITEVHFLPFNPVDKRTAITYIDTTGNWHRASKGAPEQIIELCNLKEEVKRKALSIIDKFAERGLRSLAVAKQEVPEKSKESAGAAWQFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGQNKDESVASLPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFTTGVVLGAYLAVMTVVFFWAAHASNFFSDKFGVRSIRDNEHELTAAVYLQVSIVSQALIFVTRSRSWSYAERPGLLLMVAFLIAQLIATIIAVYANWGFARIKGIGWGWAGVIWLYSIIFYIPLDILKFIIRYALSGKAWNNVTENRIAFTSKKDYGKGEREAQWATAQRTLHGLNPPETDEMLNEKNNYRELSELAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0189 742 Gene3D - 280 416 IPR023214 -
Lal8g0189 742 PRINTS P-type cation-transporting ATPase superfamily signature 274 285 - -
Lal8g0189 742 PRINTS P-type cation-transporting ATPase superfamily signature 296 306 - -
Lal8g0189 742 PRINTS P-type cation-transporting ATPase superfamily signature 379 398 - -
Lal8g0189 742 PRINTS P-type cation-transporting ATPase superfamily signature 402 414 - -
Lal8g0189 742 SUPERFAMILY HAD-like 209 426 IPR036412 -
Lal8g0189 742 Pfam haloacid dehalogenase-like hydrolase 269 393 - -
Lal8g0189 742 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 638 IPR023298 -
Lal8g0189 742 Pfam Cation transporter/ATPase, N-terminus 17 90 IPR004014 -
Lal8g0189 742 Gene3D - 76 150 - -
Lal8g0189 742 Gene3D - 417 606 - -
Lal8g0189 742 Coils Coil 686 713 - -
Lal8g0189 742 Gene3D - 691 742 - -
Lal8g0189 742 SMART Cation_ATPase_N_a_2 13 97 IPR004014 -
Lal8g0189 742 PRINTS H+-transporting ATPase (proton pump) signature 236 254 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal8g0189 742 PRINTS H+-transporting ATPase (proton pump) signature 351 367 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal8g0189 742 PRINTS H+-transporting ATPase (proton pump) signature 379 395 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal8g0189 742 PRINTS H+-transporting ATPase (proton pump) signature 410 435 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal8g0189 742 PRINTS H+-transporting ATPase (proton pump) signature 551 572 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal8g0189 742 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 354 468 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal8g0189 742 PANTHER CALCIUM-TRANSPORTING ATPASE 2 145 - -
Lal8g0189 742 PANTHER CALCIUM-TRANSPORTING ATPASE 180 714 - -
Lal8g0189 742 PANTHER CALCIUM-TRANSPORTING ATPASE 145 180 - -
Lal8g0189 742 PANTHER ATPASE 9, PLASMA MEMBRANE-TYPE 2 145 - -
Lal8g0189 742 PANTHER ATPASE 9, PLASMA MEMBRANE-TYPE 145 180 - -
Lal8g0189 742 PANTHER ATPASE 9, PLASMA MEMBRANE-TYPE 180 714 - -
Lal8g0189 742 Gene3D - 176 279 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0189 Lal-Chr8 1260513 1266755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0189 175 742 Primary Pumps ATPases AT3G42640 82.570 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0189 K01535 - gmx:100782329 1027.31