Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0185 ATGGTTAGAGAGATGGGTAATAATAATAATAATAATAATAATAATGAGGAAAAAACAAATGCATCAACAACAACATCAGCATATTCATCACCTGGTAGTACACCAGGTGTTCCTCTAGTTGGAGGGTATAAAAATGGGCATGCTAAGAAGAAGTCCCTTCTCAGCAATTGTAAATGTTTAGGTGCTAATGATTGGACCTTAGAAGATGGAACTTTTTCACCTCGTGTCTTTTGCTCATTGCCTTCCCCTCCTCCTGTCTCCACTGCTAGAAAGGTAGGAGCTGAGTTTGTTGGCACATTCATTCTCATGTTTGCTGGGACAGCCACTGCTATTGTGAACCAAAAGACAGAAGGCGCCGAGACTTTGATTGGTTGTGCCGCCTCCTCCGGACTTGCAGTTATGATCATCATCCTCTCCACTGGCCACATCTCCGGTGCTCATCTCAACCCCGCTGTCACCATTTCTTTTGCTGCATTAAAGCACTTCCCATGGAAGCATGTGCCTATGTATATTACCGCACAAGTTATAGCATCTATATGTGCTGCATTTGCTCTGAAGGAAATTTTTCACCCCTTCATGAGTGGTGGAGTCACTGTTCCTTCAGGAGGATATGGCCAAGCCTTTGCTTTAGAATTCATTATTAGTTTTAATCTCATGTTCGTTGTAACTGGAGTGGCTACCGACACAAGAGCTGTAGGAGAGCTCGCCGCGATCGCAGTAGGAGCGACTGTCATGCTCAACATACTCATAGCAGGGCCAGCCACAGGAGCCTCAATGAACCCTGTAAGAACTCTAGGCCCAGCTATTGCTGCAAACAATTATAAAGACATTTGGGTTTATCTGATAGCTCCCATACTTGGAGCTCTAGGTGGGGCAGGTATCTACACTCTGGTCAAGCTGCCTGAAGAAGATGCTATCATAGCAAAGGCTTCAGCCCCAAATAGCTTCAGAGGGTGA 957 0.4504 MVREMGNNNNNNNNNEEKTNASTTTSAYSSPGSTPGVPLVGGYKNGHAKKKSLLSNCKCLGANDWTLEDGTFSPRVFCSLPSPPPVSTARKVGAEFVGTFILMFAGTATAIVNQKTEGAETLIGCAASSGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKHVPMYITAQVIASICAAFALKEIFHPFMSGGVTVPSGGYGQAFALEFIISFNLMFVVTGVATDTRAVGELAAIAVGATVMLNILIAGPATGASMNPVRTLGPAIAANNYKDIWVYLIAPILGALGGAGIYTLVKLPEEDAIIAKASAPNSFRG 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0185 318 SUPERFAMILY Aquaporin-like 87 304 IPR023271 -
Lal8g0185 318 PANTHER AQUAPORIN NIP2-1 27 305 IPR034294 -
Lal8g0185 318 ProSitePatterns MIP family signature. 147 155 IPR022357 -
Lal8g0185 318 PRINTS Major intrinsic protein family signature 90 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0185 318 PRINTS Major intrinsic protein family signature 129 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0185 318 PRINTS Major intrinsic protein family signature 166 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0185 318 PRINTS Major intrinsic protein family signature 210 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0185 318 PRINTS Major intrinsic protein family signature 241 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0185 318 PRINTS Major intrinsic protein family signature 278 298 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0185 318 CDD MIP 90 298 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0185 318 Pfam Major intrinsic protein 87 295 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0185 318 PANTHER BNAA02G36290D PROTEIN 27 305 - -
Lal8g0185 318 TIGRFAM MIP: MIP family channel proteins 94 295 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0185 318 MobiDBLite consensus disorder prediction 1 33 - -
Lal8g0185 318 Gene3D Glycerol uptake facilitator protein. 82 310 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0185 Lal-Chr8 1244557 1246718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0185 22 304 Major Intrinsic Protein MIP AT1G80760 76.897 1.94e-150 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0185 K09874 - gmx:100815637 426.017