Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0184 ATGCCTGCTGCCGAGTTATCATCAGGTTCCGGCAATGGCCAAACCATATGTGTCACCGGTGCCGGAGGCTTCATCGCCTCTTGGATGGTCAAACTTCTCTTGCAAAAAGATGATCCAAAGAATGGTCACTTGAAAGAGTTGGAAGGGGGAGATGAGAGGCTAACTCTGCATAAAGTTGATCTTCTTGATCTTCAATCTGTCAAAGCTGCCATTCACGGTTGTGATGGTGTCTTTCACACTGCTTCACCCGTCACCGATAACCCCGAAGAAATGGTGGAGCCAGCTGTGAATGGAGCAAAGAATGTAATCATAGCAGCTGCAGAAGGAAAAGTGAGACGCGTGGTGTTTACTTCATCAATTGGTGCAGTCTATATGGACCCCACTAGGAACATCGATGTGGTGGTTGATGAGTCTTGTTGGAGTGATTTGGAGTTTTGCAAGAATACCAAGAATTGGTATTGCTATGGAAAAGCTGTGGCTGAACAAGCAGCATGGGATGAAGCAAAAGAGAAAGGGGTGGATTTAGTTGTAGTTAACCCAGTTTTGGTGCTTGGACCATTGCTACAACCAACTATTAATGCTAGCACAATTCACATCCTCAAGTACCTCACTGGCTCTGCTAAGACCTATACAAATGCCACACAGGCTTATGTTGATGTTAGGGATGTAGCATTAGCTCACATTCTTCTTTATGAGAGCCCCACTGCTTCTGGTAGATACTTATGTGCTGAAAGTTCCTTGCACCGTGGTGAGCTTGTTGAAATTCTGGCCAAGTATTTTCCAGAGTACCCAGTTCCAACCAAGTGTTCGGATGAAAAGAATCCAAGAGCAAAACCTTACATATTTTCAAAACAAAAGCTGAAAGATTTGGGGTTAGAATTCACCCCAGTGAGTCAGTGTTTATATGACACTGTTAAGAGCCTTCAGGAAAAAGGCCACCTTCCAGTTCCTACAAAGCAACAAGATTCTACTGCACTCAAATCCTAA 987 0.4417 MPAAELSSGSGNGQTICVTGAGGFIASWMVKLLLQKDDPKNGHLKELEGGDERLTLHKVDLLDLQSVKAAIHGCDGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEGKVRRVVFTSSIGAVYMDPTRNIDVVVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWDEAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYTNATQAYVDVRDVALAHILLYESPTASGRYLCAESSLHRGELVEILAKYFPEYPVPTKCSDEKNPRAKPYIFSKQKLKDLGLEFTPVSQCLYDTVKSLQEKGHLPVPTKQQDSTALKS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0184 328 CDD FR_SDR_e 17 292 - -
Lal8g0184 328 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 318 - -
Lal8g0184 328 Pfam NAD dependent epimerase/dehydratase family 16 236 IPR001509 -
Lal8g0184 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 309 IPR036291 -
Lal8g0184 328 Gene3D - 7 328 - -
Lal8g0184 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0184 Lal-Chr8 1237701 1240976 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0184 12 268 Monolignol Biosynthesis Gene Families AT1G80820 70.522 4.99e-134 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0184 K09753 - gmx:100789070 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0184 8 1237701 1240976 Lal8g0184 8 1237701 1240976 ECH