Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0183 ATGACTATCACAGGTTCTGGGCAACCGCAATTCATTACAAGAACCGGGACTCAGAACGCATCGAATGCCCCTCTGATTGAGAACTCAGATGCTGAGCAAATTGTTGTACCTGATAATAGCAGCTGGAAAAATTTCTTTAGATACTTGGGTCCTGGATTCCTTGTTTCCATTGCATATATAGACCCGGGAAACTTCGAGACAGATCTTCAGGCTGGGGCACAGTATAAATATGGGTTACTTTGGGTCATATTGGTGTCATCATGTGCTGCTCTTGTAATTCAAACAATGGCAGCCAATCTTGGGGTGATCACTGGAAAACACTTAGCAGAGCATTGTAGAGCTGAATATCCCAAGGTGGCCAACATTATCCTTTGGATCATTGCAGAAATTGCCATAGTGGCCTGTGATATTCCTGAAGTAATTGGGACAGCCTTTGCATTGAACATGCTCTTCCACATAAAAATTTGGATTGGTGTTCTTCTGACAGGACTCAGTACATTGGTCCTCTTAGCATTACAGCAATATGGGATTAGGAAACTAGAATTCTTGATTGCATTTCTAGTATTTACAATTGCTGCATGCTTTTTTGCTGAGCTCGGATATGCAAAGCCTGATGCTAAAGAAGTTATAGACGGTCTTTTCATGCCACAACTTAAAGGGAGTGGTTCTACTGGTCTTGCAATTTCACTTCTCGGGGCTATGGTTATGCCGCATAATCTCTTCCTGCACTCAGCATTGGTGCTTTCTAGGAAAGTACCGCAATCAGTTCGGGGAATCAATGAGGCTTGCCGATTTTACATGATAGAAAGTGCCATTGCTCTTACAGTGGCTTTTCTCATAAATGTTTCTGTTATTTCTGTAAGCGGCTCTGTTTGCAATTCTTCAAATTTGAATGCAGAAGATCAGAAGAGTTGTCAGAATTTGGATCTGAACCAAGCCTCATTTCTGCTTAAAAATGTCTTGGGGAAATGGAGTTCAAAACTGTTTGCAGTTGCTTTGCTTGCATCCGGTCAAAGTTCTACCATAACAGGAACCTATGCAGGGCAGTATGTCATGCAGGGATTTCTTGATTTACGACTGAAGCCATGGATTCGTAATATGTTAACTCGTAGCTTAGCCATAGTTCCTAGTTTGATTGTTGCAGCCATTGGTGGCCCTAATGCGGCCGGAGAGCTCATAATAATTGCATCGATGATCTTATCATTTGAGCTTCCCTTTGCTTTGGTTCCACTCCTGAAGTTCACAAGCAGCAAAACCAAGATGGGAACACATGTCAACTCTATTATGCTTTCAGCTGTTACATGGATGATTGGTTCCCTGATTATGGCCATTAACATATACTATATAGTCTCTGGCTTCATCAAACTGCTTGTTCATAGTCACTTAAACCTTGTGGCCAAGGTGTTTCTTGGGATGTTAGGATTTTCAGGTATAGCAATATATTTGGCAGGTATAGCATACCTAGTATTTCGCAAAAATAAAAAAATGTCGCACCTTTTGTCGCTAACAGCATTAGAAAATCAGCAAATGGGAAATGAACAAGGTAACAATGGGTCACTCTATAATCTCCCAAGAGAAGACATAGTAAGCATGCAGTTGCCTCAAAGAACTACTCCTCTAGATCTTGATTGA 1632 0.413 MTITGSGQPQFITRTGTQNASNAPLIENSDAEQIVVPDNSSWKNFFRYLGPGFLVSIAYIDPGNFETDLQAGAQYKYGLLWVILVSSCAALVIQTMAANLGVITGKHLAEHCRAEYPKVANIILWIIAEIAIVACDIPEVIGTAFALNMLFHIKIWIGVLLTGLSTLVLLALQQYGIRKLEFLIAFLVFTIAACFFAELGYAKPDAKEVIDGLFMPQLKGSGSTGLAISLLGAMVMPHNLFLHSALVLSRKVPQSVRGINEACRFYMIESAIALTVAFLINVSVISVSGSVCNSSNLNAEDQKSCQNLDLNQASFLLKNVLGKWSSKLFAVALLASGQSSTITGTYAGQYVMQGFLDLRLKPWIRNMLTRSLAIVPSLIVAAIGGPNAAGELIIIASMILSFELPFALVPLLKFTSSKTKMGTHVNSIMLSAVTWMIGSLIMAINIYYIVSGFIKLLVHSHLNLVAKVFLGMLGFSGIAIYLAGIAYLVFRKNKKMSHLLSLTALENQQMGNEQGNNGSLYNLPREDIVSMQLPQRTTPLDLD 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0183 543 PRINTS Natural resistance-associated macrophage protein signature 124 150 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal8g0183 543 PRINTS Natural resistance-associated macrophage protein signature 152 171 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal8g0183 543 PRINTS Natural resistance-associated macrophage protein signature 177 198 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal8g0183 543 PRINTS Natural resistance-associated macrophage protein signature 227 250 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal8g0183 543 PRINTS Natural resistance-associated macrophage protein signature 337 356 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal8g0183 543 PRINTS Natural resistance-associated macrophage protein signature 365 382 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal8g0183 543 PRINTS Natural resistance-associated macrophage protein signature 397 416 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal8g0183 543 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 10 543 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal8g0183 543 Pfam Natural resistance-associated macrophage protein 65 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal8g0183 543 Hamap Divalent metal cation transporter MntH [mntH]. 37 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal8g0183 543 PANTHER METAL TRANSPORTER NRAMP1 10 543 - -
Lal8g0183 543 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 44 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0183 Lal-Chr8 1230336 1238226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0183 13 536 Inorganic Solute Cotransporters AT1G15960 76.471 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0183 K21398 - gmx:100797298 868.996