Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0174 ATGGCTTCATCTCCATTTTCCTTAACTTCTGATATCTTTCTGCTAGCACTAGTGAAGGGGAAGACTTTGGTGAATTCTGATGAGGATATTCCCTTGCCTGTGAAGGAAAATGGAAAATCTGTAATCAAAGCTGAAGATGCCAAGGTTTCTGAACCTAAAAAGGCTGATGCTAAGAGTGGTGCCCCAGCTAAACAAGTGAAGATCGCTGATCCCAAGAAAGATGATGAGGATGATGATGATGATGATGATTCTGATGATGATGCTGATTTTGGAAGTTCTGATGATGAGATGGATGATGTTGATAATGATAGTGACGAAGGTGACAGTGAAGAAGATGAAGAGACCCCTCCTAAGAAGGTGCTACCTGGAAAGAAGAGGGCCAATGATTCTGCATCAAAAACTCCAGTTTCCAACAAGAAAGCTAAAAATGCCACCCCTGAAAAGACTGATGGTAAGAAAGGTGTCCATACAGATACTCCTCACCCTGCAAAGAAGGCTGGAAAGACTCCCAAAAGTGATGCCAAGGCTCAGACCCCCAAGTCAGCCGGACAGTTCAGTTGCGGTAGCTGTCAGAAGGCTTTCAACTCTGAAGGTGGTCTGCAACAACATAACAAAGCTAAGCATGACAAGTGA 633 0.4376 MASSPFSLTSDIFLLALVKGKTLVNSDEDIPLPVKENGKSVIKAEDAKVSEPKKADAKSGAPAKQVKIADPKKDDEDDDDDDDSDDDADFGSSDDEMDDVDNDSDEGDSEEDEETPPKKVLPGKKRANDSASKTPVSNKKAKNATPEKTDGKKGVHTDTPHPAKKAGKTPKSDAKAQTPKSAGQFSCGSCQKAFNSEGGLQQHNKAKHDK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0174 210 MobiDBLite consensus disorder prediction 27 210 - -
Lal8g0174 210 MobiDBLite consensus disorder prediction 174 201 - -
Lal8g0174 210 ProSiteProfiles Zinc finger C2H2 type domain profile. 185 210 IPR013087 -
Lal8g0174 210 MobiDBLite consensus disorder prediction 74 112 - -
Lal8g0174 210 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 25 206 - -
Lal8g0174 210 MobiDBLite consensus disorder prediction 143 171 - -
Lal8g0174 210 MobiDBLite consensus disorder prediction 39 60 - -
Lal8g0174 210 ProSitePatterns Zinc finger C2H2 type domain signature. 187 208 IPR013087 -
Lal8g0174 210 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 25 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0174 Lal-Chr8 1183591 1185297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0174 125 208 C2H2 Transcription Factor Family AT5G03740 54.945 9.50e-23 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal8g0174 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0174 - - lang:109358867 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0174 8 1183591 1185297 Lal8g0174 8 1183591 1185297 ECH