Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0169 ATGGCGGAGGACCAAAATGAGGGGAGTGATTACAGCTCAGAAGAGGAAGGAACAGAGGATTATAGGCATGGAGGCTACCATGCGGTTCAGATTGGCGACACTTACAAGAATGGTTGCTATGTGGTGCAGAGCAAACTAGGCTGGGGACATTTTTCCACTGTGTGGCTCGCTTGGGATACTCTCAAATCGCGGTATGTTGCCCTAAAAATTCAAAAGAGTGCTCAGCACTACACTGAAGCAGCAATGGATGAAATAAAGATTCTTAAGCAGGTTGCAGAGGGGGATCTTGATGACAAGAAATGTGTTGTCAAGCTATTGGATCACTTTAAGCATTCAGGGCCTAACGGCCAGCACGTGTGTATGGTTTTTGAATTCCTAGGTGACAATCTTCTTACCCTTATAAAGTACAATGATTACCGAGGGGTTCCCCTTCCCATGGTTAAAGAAATTTGTTTCCATATTTTGGCTGGTCTGGATTACTTGCATCGCGAGCTCTCAATAATACACACTGATTTGAAGCCAGAGAATGTCCTGCTTCTGTCTCCAATAGATCCGTGCAAGGATCCAAGAAAATCAGGTGCTCCACTTGTCCTTCCAAACACCAAGGATAAGATTGTGACCACAAGAGATGATAAAAGTTTGAATGGAGATCTGACCAAGAACCAGAAAATGAAAATACGGAAGAAGGCAGCTCAAGGCTGTGTTTGGAAGGAAAGTCCCGAGGAAGCTGAGGAGGATTCTGAAGAACCTGAGCAAGATGATTTTAGTAATGATGTGAATCCAAGTGTTGAATCTGGTGAAGGTAAACCTATTAGTCCTGTGACTGTGAGTGAAGATGAATGGACAAAGGCTACGGAAACTAAGGATGTTCCACAAGGAAGTCATGGTCGTGGGAGAGTTAGCAGTTCTACAAGGAAAAATTTGCTGGCAGCTGTTGATTTCAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAGACGAGGCAGTATCGGTGTCCCGAGGTTATTCTTGGATCTAAATACTCAACTCCAGCAGATCTATGGTCTTTTGCTTGCATTTGCTTTGAGCTTGTCACTGGCGATGTGCTTTTTGATCCTCACAGCGGTGACAATTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGAATGATGCCTCGCAAGATTGCGCTAAGTGGCCGCTATTCCCGGGAGTTTTTCAACAGATCTGGTGATTTGAGGCACATCCGTCAGTTGCATTTCTGGCCTGTTAATAAGGTGCTGATGGAGAAGTATGATTTCAGTGAGCAAGAAGCAAATAACATGGCTGATTTCCTTGTTCCATTACTTGATTTTGTCCCTGAAAAGAGGCCAACAGCTGCTCAGTGCCTTAGTCATCCATGGTTCAGTGCAGGTCTTCGGACACTTCAACCCTCGTTGACTATTGTGCTACCTGATGCTATGGATGTAGAAATGTCTGAAAATATAAAGAGGGAAAAGGGTGAGCATGAGGCTATGGAAGTTGGTGTGGGGAACATAGCTATTATTGGATCTCCAAAGCCACTCAAAGAGTCCCAACCAATAAGGTCATCAAAATAG 1620 0.4389 MAEDQNEGSDYSSEEEGTEDYRHGGYHAVQIGDTYKNGCYVVQSKLGWGHFSTVWLAWDTLKSRYVALKIQKSAQHYTEAAMDEIKILKQVAEGDLDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYNDYRGVPLPMVKEICFHILAGLDYLHRELSIIHTDLKPENVLLLSPIDPCKDPRKSGAPLVLPNTKDKIVTTRDDKSLNGDLTKNQKMKIRKKAAQGCVWKESPEEAEEDSEEPEQDDFSNDVNPSVESGEGKPISPVTVSEDEWTKATETKDVPQGSHGRGRVSSSTRKNLLAAVDFKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELVTGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALSGRYSREFFNRSGDLRHIRQLHFWPVNKVLMEKYDFSEQEANNMADFLVPLLDFVPEKRPTAAQCLSHPWFSAGLRTLQPSLTIVLPDAMDVEMSENIKREKGEHEAMEVGVGNIAIIGSPKPLKESQPIRSSK 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0169 539 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Lal8g0169 539 MobiDBLite consensus disorder prediction 204 219 - -
Lal8g0169 539 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Lal8g0169 539 MobiDBLite consensus disorder prediction 1 22 - -
Lal8g0169 539 Gene3D Transferase(Phosphotransferase) domain 1 123 477 - -
Lal8g0169 539 MobiDBLite consensus disorder prediction 191 219 - -
Lal8g0169 539 MobiDBLite consensus disorder prediction 241 255 - -
Lal8g0169 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Lal8g0169 539 PANTHER SERINE KINASE-LIKE PROTEIN 8 536 - -
Lal8g0169 539 CDD STKc_SRPK 29 476 - -
Lal8g0169 539 Pfam Protein kinase domain 306 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0169 539 Pfam Protein kinase domain 40 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0169 539 SUPERFAMILY Protein kinase-like (PK-like) 35 492 IPR011009 -
Lal8g0169 539 SMART serkin_6 40 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0169 539 MobiDBLite consensus disorder prediction 231 302 - -
Lal8g0169 539 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 536 - -
Lal8g0169 539 ProSiteProfiles Protein kinase domain profile. 40 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0169 Lal-Chr8 1143400 1146829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0169 1 539 EF-hand Containing Proteins AT5G22840 66.245 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Lal8g0169 Pkinase 2.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0169 K08832 - gmx:100791829 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0169 8 1143400 1146829 Lal8g0169 8 1143400 1146829 ECH
Lal25g0215 25 1469459 1474263 Lal8g0169 8 1143400 1146829 LSH
Lal10g1210 10 18489222 18493779 Lal8g0169 8 1143400 1146829 LSH