Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0163 ATGTGCAATCTGATGCACATTAATGACTATGAGCTAAACAACTTCATTGGCGATGCCAACGTTGATCATTTTATCAATTCTATCCGTGGGGGAAATGAAGATCCCATTTGTAACTTTGATTCTTACTTTATCAATGATTGCTTCTTTGATAACAAGTTCCAATCCTGTCACGGAAGCCCAATATTTGATCATCAGACTAATAATAATTCTGTCAATGTCTATGATCCAATTCTAAGCTCTACATTGAGTCACGTTCCTCATATTTTAATAGGAAGCTTATGGGAAAGGAGACAATTTCTGCCAACATGGGACGATTGTATATCCGCATGCACAAATGTTAAAGTAGCCAACATAGACTTACTAAAAACTCATCGAGTTGACAAGAGTACTGAAACCCAACCATTACGAACTTATATGCACATGCAGAAGGATAAGGCCTGTGTCATTGGAGATGCGGTACAATATGTGCACGATCTTCAAGCAAAAGCTAAGAAGCTGAAGGATGAGGTTCCAGGACAAGAAACATCACTATTTAATGTCTAA 543 0.3775 MCNLMHINDYELNNFIGDANVDHFINSIRGGNEDPICNFDSYFINDCFFDNKFQSCHGSPIFDHQTNNNSVNVYDPILSSTLSHVPHILIGSLWERRQFLPTWDDCISACTNVKVANIDLLKTHRVDKSTETQPLRTYMHMQKDKACVIGDAVQYVHDLQAKAKKLKDEVPGQETSLFNV 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0163 180 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 143 178 - -
Lal8g0163 180 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 7 84 - -
Lal8g0163 180 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 7 84 - -
Lal8g0163 180 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 143 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0163 Lal-Chr8 1111212 1112221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0163 4 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 32.812 2.61e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0163 - K20242 gmx:100787584 108.997