Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0147 ATGTCAATGGCTATGACTCAACACAGAGAGAGTAACAGCAGTGGTGGGAGCAGCATTGATAAAAACCTTGATTCTGGTAAATATGTGCGCTACACCGCTGAGCAAGTTGAAGCTCTTGAAAGGGTTTACACAAAGTGCCCCAAACCCAGTTCCATGAGAAGACAACAGTTAATCAGAGAGTTCCCAATTCTCTCCAACATTGAACCTAAGCAAATCAAAGTTTGGTTCCAGAATCGAAGGTGTAGGGAGAAGCAGAGAAAAGAGGCTTCACAGCTTCAGACCGTGAATCGGAAACTGACAGCAATGAACAAGTTGTTGATGGAGGAAAACAATCGGTTGCAGAAACAGGTTTCACAGTTAGTATCCGAAAATGGCTATATGCGGCATCAATTGCATCCTCCATCAGCACGAGCTACTGATGGAAGTTGTGATTCAGTGGTTACCACTCCTCAGCATTCTATGAGAGATGCTAATAATCCTGCTGGATTCCTATCTATTGCAGAGGAGACTTTGGCAGAGTTCCTTTCGAAGGCTACAGGAACTGCTGTTGACTGGGTCCAGATGCCCGGAATGAAGCCTGGTCCAGAGTCGGTTGGGATCTTTGCCATTTCAGAAAGTTGCACAGGAGTGGCAGCTCGTGCATGTGGTCTTGTTAGTTTAGAACCTACAAAGGTTGCGGAGATCCTAAAAGATCGTCCATCTTGGTCACGAGAGTGTCGGAGTCTAGAAGTTTTCACAACGGTCCCTGCTGGAAATGGAGGAACAATTGAACTTGTTTACACACAGACGTATGCTCCAACCACACTGGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACTACAACTTTAGGCAATGACAGTCTTGTGGTTTGTGAGAGGTCACTGTCTGGTTCTGGTGCTGGGCCTAATGCAGTAGCTGCATCTCAGTTTGTCAGGGCTGAAGTGCTGCCTAGTGGTTATTTGATTCGACCATGTGAAGGTGGAGGATCGATCATCCACATTGTAGACCACCTAAATCTTCAGGCATGGAGTGTACCAGAAGTGATGCGACCACTTTATGAATCAGCAAAAATGGTAGCTCAGAAAATGACAATTGCGGCCATGCAGCAGATACATCCTCTAGAATTTGCTGTTGGTGTTGTTTCTGCACTTCGCTATATCAGGCAAATAGCACAGGAAACAAGTGGTGAAGTGGTATATGGCTTGGGTAGGCAACCTGCTGTTCTGAGAACTTTCAGCCAAAGGTTGAGTAGAGGCTTCAACAATGCTGTCAATGGATTCAATGATGATGGCTGGTCTCTATTGAACTGTGATGGTGCAGAGGATGTAATCATTGCAGTCAATTCCACCAAGAATTCAATTGGCACTTCTAATCCAGCTAGTTCCCTTACTTCCTTTGGAGGAATTCTGTGTGCAAAGGCTTCTATGTTACTCCAAGACACCCCTCCATCAGTTTTGATTCGCTTTCTGAGGGAACATCGCTCGGAGTGGGCCGATTTTAATGTCGATGCATATTCTGCTGCTTCACTTAAAGCTGGCTCATATGCCTATCCTGGAATGAGGCCTACAAAGTTCACTGGCAATCAAATAATCATGCCACTTGGACATACAATTGAACATGAAGAGATGCTAGAAGTTATCCGGCTTGAAGGTCACTCTCTTGCTCAGGAGGATGCTTTTGTTTCTAGGGACATTCATCTCTTACAGATATGTAGTGGAGTTGATGAAAATTCCGCTGGGCTTTGTTCTGAGCTCATATTTGCTCCAATTAATGAAATGTTTCCAGATGATGCTCCATTGGTGCCTTCCGGTTTCCGCATTATGCCACTGGATTCAAAACCAGGTGATAAAAAGGATGTGACAACAGCAAACCAAACCTTGGATTTGACATCTGGTCTTGAAGTTGGTCCATCAACAAACAATGCCGCTGGAGATGCATCGTCATGTTATAGCAATCGATCGGTGTTGACTATAGCCTTCCAGTTTCCTTTTGACAGCAGTCTGCAAGATAATATTGCACTCATGGCAATTCAATATGTCCGGAGTGTGATCTCTTCTGTGCAGAGGATTGCCATGGCTATATCTCCACCTGGTATAAACCCGGCCATCAGTGCTAAATCCTCCCCGGGCTCTCCAGAAGCTCTTACACTAACTCACTGGATCTGCCAGAGTTATAGTTATCATTTGGGGATGGAGTTACTGAGATTTGATACAGTTGTTGGTGACTCAATGCTGAAACATTTGTGGCATCATCAAGATGCCATTTTGTGCTGTTCTTTGAAGTCCCTACCCGTTTTCGTCTTTGCGAACCAATCTGGCCTTGACATGATGGAAACAACTCTAGTGGCTTTACAAGACATAACATTAGATAAGATATTTGATGAATCTGGACGCAAGGCATTTTTTGCAGATTTTGCTAAGTTAATGCAGCAGGGTTTTGCTTATCTACCAGGTGGGATCTGCATGTCCACAATGGGGAGACATGTTTCATATGACCAAGCTATTGCATGGAAAGTGTTTGCTGAAGGAGATAATAATAATAATAATAATAATAATGTTCATTGCTTAGCTCTCTCTTTCATAAATTGGTCATTTGTATGA 2604 0.4409 MSMAMTQHRESNSSGGSSIDKNLDSGKYVRYTAEQVEALERVYTKCPKPSSMRRQQLIREFPILSNIEPKQIKVWFQNRRCREKQRKEASQLQTVNRKLTAMNKLLMEENNRLQKQVSQLVSENGYMRHQLHPPSARATDGSCDSVVTTPQHSMRDANNPAGFLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPESVGIFAISESCTGVAARACGLVSLEPTKVAEILKDRPSWSRECRSLEVFTTVPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTTLGNDSLVVCERSLSGSGAGPNAVAASQFVRAEVLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVMRPLYESAKMVAQKMTIAAMQQIHPLEFAVGVVSALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNNAVNGFNDDGWSLLNCDGAEDVIIAVNSTKNSIGTSNPASSLTSFGGILCAKASMLLQDTPPSVLIRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTKFTGNQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENSAGLCSELIFAPINEMFPDDAPLVPSGFRIMPLDSKPGDKKDVTTANQTLDLTSGLEVGPSTNNAAGDASSCYSNRSVLTIAFQFPFDSSLQDNIALMAIQYVRSVISSVQRIAMAISPPGINPAISAKSSPGSPEALTLTHWICQSYSYHLGMELLRFDTVVGDSMLKHLWHHQDAILCCSLKSLPVFVFANQSGLDMMETTLVALQDITLDKIFDESGRKAFFADFAKLMQQGFAYLPGGICMSTMGRHVSYDQAIAWKVFAEGDNNNNNNNNVHCLALSFINWSFV 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0147 867 SUPERFAMILY Homeodomain-like 26 92 IPR009057 -
Lal8g0147 867 ProSiteProfiles START domain profile. 156 357 IPR002913 GO:0008289
Lal8g0147 867 SMART START_1 165 375 IPR002913 GO:0008289
Lal8g0147 867 CDD bZIP 79 118 - -
Lal8g0147 867 SUPERFAMILY Bet v1-like 165 354 - -
Lal8g0147 867 CDD homeodomain 27 87 IPR001356 GO:0003677
Lal8g0147 867 Gene3D - 201 375 IPR023393 -
Lal8g0147 867 MobiDBLite consensus disorder prediction 1 23 - -
Lal8g0147 867 Pfam MEKHLA domain 717 866 IPR013978 -
Lal8g0147 867 Pfam Homeodomain 27 85 IPR001356 GO:0003677
Lal8g0147 867 ProSiteProfiles 'Homeobox' domain profile. 22 86 IPR001356 GO:0003677
Lal8g0147 867 Pfam START domain 166 371 IPR002913 GO:0008289
Lal8g0147 867 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 867 IPR044830 GO:0003700
Lal8g0147 867 MobiDBLite consensus disorder prediction 1 21 - -
Lal8g0147 867 SMART HOX_1 24 90 IPR001356 GO:0003677
Lal8g0147 867 Coils Coil 92 123 - -
Lal8g0147 867 Gene3D - 20 94 - -
Lal8g0147 867 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0147 Lal-Chr8 994727 1001740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0147 1 867 Homeobox Transcription Factor Family AT5G60690 77.011 0.0 1386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal8g0147 START 5.5e-50 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0147 K09338 - gmx:100804870 1459.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0147 8 994727 1001740 Lal8g0147 8 994727 1001740 ECH