Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0136 ATGGCCAGAGGCGCTTCTCAATCTCAGTCTACAGCTTCCGCTACAACCACCAGACCTGGAGTCATGGCTCCTCGCGGCTCTGCTGCTGCCACCGCAGGCATGCGCCGCCGTCGTCTAGGCGGAGGAGGAAGCACCGGAAATAGCTCCGTTGGAACCGGAGGAGGCACCGGAGGCAGCAACATGCTTCGATTCTACACCGATGACGCGCCAGGGCTGAAGATATCACCGACGGTGGTGCTGGTAATGAGCCTCTGCTTCATCGGATTCGTCACCGCTCTCCACAAATCCGAGATCGCTTTGACAGAGAACAACAGGGCAGCTGCTGCGGCCTTGAATGCTGAGGTTCGTCGAAGCAAGGGTAGGCTCATGGATGAGGTCCCCAAACTCCGAAAATTAGCCAATAAGAAGGTTAAAGGCCTCTCAAATGAAGAAATGGTGATTCGTCATGATCTTGTTCTAGCCTTGCCTGAAAGAATCCAAGCAATACCAGATGGTATTACTGGCGCTGCTGCGAATCAAACCGGAGGATGGGCAGCTACCTCATCTAATCCGCATATCAAGTTCGATTCAGGGCTTGATATCATATCAGAGGGATTGGATACATTGAAGAATCTGGCCCATGATATGAATGAGGAAATGGATCGCCAAGTTCCTTTAATGGACGAAATTGACACAAAGGTGGATAGGGCAACATCTGATTTGAAGAACACTAATGTTAGGCTGAAGAAAACTCTCACAGAGCTGAGATCTAGTCGAAATTTCTGCATTGACATCATTTTGCTGTGTGTTCTTCTGGGCATAGTTATGTATATATACAATCAACTGAGGTGA 831 0.4946 MARGASQSQSTASATTTRPGVMAPRGSAAATAGMRRRRLGGGGSTGNSSVGTGGGTGGSNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHKSEIALTENNRAAAAALNAEVRRSKGRLMDEVPKLRKLANKKVKGLSNEEMVIRHDLVLALPERIQAIPDGITGAAANQTGGWAATSSNPHIKFDSGLDIISEGLDTLKNLAHDMNEEMDRQVPLMDEIDTKVDRATSDLKNTNVRLKKTLTELRSSRNFCIDIILLCVLLGIVMYIYNQLR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0136 276 MobiDBLite consensus disorder prediction 1 57 - -
Lal8g0136 276 PANTHER SYNTAXIN 92 190 IPR045242 -
Lal8g0136 276 PANTHER SYNTAXIN 191 273 IPR045242 -
Lal8g0136 276 MobiDBLite consensus disorder prediction 1 20 - -
Lal8g0136 276 Pfam Sec61beta family 58 95 IPR016482 -
Lal8g0136 276 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 189 244 IPR000727 -
Lal8g0136 276 CDD SNARE_Qc 189 243 - -
Lal8g0136 276 Pfam SNARE domain 219 268 IPR000727 -
Lal8g0136 276 PANTHER SYNTAXIN-72 191 273 - -
Lal8g0136 276 PANTHER SYNTAXIN-72 92 190 - -
Lal8g0136 276 SUPERFAMILY SNARE fusion complex 185 243 - -
Lal8g0136 276 MobiDBLite consensus disorder prediction 42 56 - -
Lal8g0136 276 Gene3D - 185 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0136 Lal-Chr8 934233 938498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0136 91 276 SNARE and Associated Proteins AT3G09740 58.904 8.15e-85 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0136 K08506 - gmx:100817729 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0136 8 934233 938498 Lal8g0136 8 934233 938498 ECH