Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0133 ATGGATTGCAGTGTCACAAACACCCCTAATAATTCATCTCCATCACTTTCTCACTCTTCTTCTTTATCTCCCACCAATTCCTCATTTTCTCCTCCACAAGGTATAGTTCCTCAAATAGTGATGACCCCTTGTGCTGCATGCAAGATTTTGAGGCGAAGATGTGCTGAAAAATGTATATTGGCACCTTATTTTCCTCCAACTGAACCTTCCAAATTCACCATTGCACACCGTGTCTTTGGAGCCAGCAACATCATCAAGTTTTTACAGGAACTTCCAGAGTTTCAAAGAGCTGATGCAGTGTCTAGCATGGTTTATGAGGCTGGTGCAAGAATAAGAGATCCAGTATATGGTTGTGCAGGCACAATTTGCAACCTCCAAAAGCAAGTTAGTGAGCTTCAAGCACAATTAGCGAAGACACAAGCTGAGGTTGTAAACATGCAATTACAACAAGCCAATCTAGTGGCTCTAATTTGCATGGAAATGGCACCACAGGAACCATCACCACAACAATCATTGGACAATTTCATTTCAAGTCCTCACCACAACAATATTATTGGCTATCAGAACAATCTCAACTTCTATGAGGAGAACATTAGCCTAAACTCATTTTTGGAGCCTCTTTGGACATGA 630 0.4127 MDCSVTNTPNNSSPSLSHSSSLSPTNSSFSPPQGIVPQIVMTPCAACKILRRRCAEKCILAPYFPPTEPSKFTIAHRVFGASNIIKFLQELPEFQRADAVSSMVYEAGARIRDPVYGCAGTICNLQKQVSELQAQLAKTQAEVVNMQLQQANLVALICMEMAPQEPSPQQSLDNFISSPHHNNIIGYQNNLNFYEENISLNSFLEPLWT 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0133 209 Pfam Lateral organ boundaries (LOB) domain 43 140 IPR004883 -
Lal8g0133 209 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 25 201 - -
Lal8g0133 209 Coils Coil 122 149 - -
Lal8g0133 209 MobiDBLite consensus disorder prediction 1 30 - -
Lal8g0133 209 ProSiteProfiles LOB domain profile. 42 143 IPR004883 -
Lal8g0133 209 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 25 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0133 Lal-Chr8 924099 925621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0133 39 209 AS2 family AT2G28500 62.567 1.37e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal8g0133 LOB 7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0133 - - gmx:100819336 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0133 8 924099 925621 Lal8g0133 8 924099 925621 ECH
Lal25g0169 25 1085787 1086949 Lal8g0133 8 924099 925621 LSH
Lal10g1242 10 18701158 18702940 Lal8g0133 8 924099 925621 LSH
Lal8g0133 8 924099 925621 Lal1g0365 1 2212661 2216475 PCT
Lal8g0133 8 924099 925621 Lal2g0270 2 1572536 1573600 PCT
Lal1g0365 1 2212661 2216475 Lal8g0133 8 924099 925621 PCT
Lal2g0270 2 1572536 1573600 Lal8g0133 8 924099 925621 PCT