Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0130 ATGGAAAAATTCATCGATAACTTGCCACCGATGGATCTGATGCGATCCGAGAAGATGAGTTTCGTTCAGCTCATCATCCCCGTCGAGTCCTCTCACCGTGCCATCTCCTATTTAGGCCAACTCGGTCTCCTCCAATTCCGTGACTTAAATGCCGATAAAAGCCCCTTCCAGAGGATGTTTGTTAATCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTCAAGGATCAAATTAATAAAGCTGGTTTAGTGTCTTCCTCTCACCCCGTATTGCAACCAGGCATTGATTTGGAGGATTTAGAGATGCAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCTAATAGTGACAAACTCCGGCAATCATATAATGAACTTTTGGAGTTCAAGATTGTATTGCAGAAGGCTTGTGGTTTTCTTGTCTCAAGTCATGGTCATGCTGTTCCAGACGAGAGAGAACTTCAAGAGGATGTATACTCTCATGATCAATATGTTGAGACAGGATCTTTACTTGAACAGGAAATGGGGCCTGGACCATCAAACCAATCTGGTTTAAGATTTATCAGTGGAATAATTTGTAAATCCAAGATTCTTAGGTTTGAAAGGATGCTGTTTCGTGCCACAAGAGGCAATATGCTTTTCAATCAAGCACCAGCTGATGAACAAATCATGGATCCTGTTTCAACTGAAATGATTGAGAAAACAGTTTTCGTTGTCTTTTTCTCGGGGGAACAGGCAAGAACAAAGATTCTGAAAATTTGTGAGGCGTTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATGACTAAACAGAGGCAAATAACTAGAGAGGTTTCATCACGTCTTACTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCACCGGAATAAGGCTCTAGCTTCTGTAGAGGTTCATCTAGCACAATGGATCAACATGGTAAGAAGAGAGAAAGCCGTGTATGATACATTGAACATGTTAAATTTTGACGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTATATTTGCAAAAACACAGATCCAGGAGGCACTACAACGTGCATCTTTTGATAGCAGCTCTCAAGTTGGCATAATATTCCATCCAATGGATTCAGTGGAATCACCACCTACATATTTTAGGACAAACACTTTTACAAGTCCATATCAGGAAATTGTTGATGCATATGGCGTTGCGAGATACCAAGAAGCAAATCCTGCAGTGTACACAACTATTATATTCCCCTTCCTATTTGCTGTGATGTTTGGAGATTGGGGTCATGGGATTTGCCTATTGCTGGGAGCATTAGTTCTTATTGCTCGTGAAAGCAAGCTTAGCACTCAGAAACTTGGAAGCTTTATGGAAATGTTATTCGGCGGGCGCTATGTGCTTCTTTTGATGTCACTATTTTCAATCTATTGTGGATTAATCTACAATGAATTCTTTTCTGTTCCTTTTCACATATTTGGTGCGTCCGCTTATAATTGCCGAGATAGTTCATGCAGGGATGCACATACTATTGGCTTAGTCAAATACAAAGATCCATACCCATTTGGCGTGGATCCTAGCTGGCGTGGAAGTCGTTCAGAATTGGCTTTTCTGAATTCTTTGAAGATGAAGATGTCCATTCTGTTTGGTGTTGTGCATATGAACTTAGGAATTATGTTAAGTTATTTCAATGCTCGTTTCTTTGGAAGCTCACTGGATATAAGGTACCAGTTTGTGCCACAAATGATTTTCCTCAACAGTCTATTTGGGTATCTTTCCTTTCTCATTGTTCTTAAGTGGTGTACTGGATCTCAGGCAGATCTTTATCATGTTATGATATACATGTTTTTAAGCCCCACAGACAACCTTGGTGAGAATCAGTTGTTCTGGGGCCAGAGGCCACTTCAAATTGTGTTGTTGCTTTTGGCTCTAATTGCAGTTCCGTGGATGCTCTTTCCAAAACCATTTATACTAAAGAAGCTTTACACTGAGAGATTTCAAGGTCGTAGTTATGGTCTGCTTAATAACTCCGAGATGGACCTTGAATTGGAGCCAGATTCTGCAAGGCAACAGCATCATGAAGAATTCAATTTCACCGAGGTCTTTGTTCATCAAATGATCCACTCCATTGAGTTTATTCTAGGTTCCGTTTCCAATACAGCTTCATACCTTCGACTTTGGGCATTAAGTTTGGCTCACTCAGAACTTTCGACTGTTTTCTATGAGAAAGTCTTGCTTCTTGCTTGGGGGTATGACAATCTTGTCATTCGGTTAGTGGGATTAGCTGTGTTTGCCTTTGCAACTGCCTTCATACTACTTATGATGGAATCTCTGAGTGCTTTTCTTCATGCCCTACGTCTTCATTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAAGCCTTTTTCCTTTGGCTCCTTAACAGAGGACGATGATTGA 2463 0.4076 MEKFIDNLPPMDLMRSEKMSFVQLIIPVESSHRAISYLGQLGLLQFRDLNADKSPFQRMFVNQVKRCAEMSRKLRFFKDQINKAGLVSSSHPVLQPGIDLEDLEMQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLVSSHGHAVPDERELQEDVYSHDQYVETGSLLEQEMGPGPSNQSGLRFISGIICKSKILRFERMLFRATRGNMLFNQAPADEQIMDPVSTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDMTKQRQITREVSSRLTDLEATLDAGIRHRNKALASVEVHLAQWINMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALQRASFDSSSQVGIIFHPMDSVESPPTYFRTNTFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIARESKLSTQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGASAYNCRDSSCRDAHTIGLVKYKDPYPFGVDPSWRGSRSELAFLNSLKMKMSILFGVVHMNLGIMLSYFNARFFGSSLDIRYQFVPQMIFLNSLFGYLSFLIVLKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLALIAVPWMLFPKPFILKKLYTERFQGRSYGLLNNSEMDLELEPDSARQQHHEEFNFTEVFVHQMIHSIEFILGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFGSLTEDDD 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0130 820 PIRSF ATP6V0A1 9 820 IPR026028 GO:0000220|GO:0046961
Lal8g0130 820 Pfam V-type ATPase 116kDa subunit family 37 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lal8g0130 820 PANTHER VACUOLAR PROTON ATPASES 5 820 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lal8g0130 820 Coils Coil 100 127 - -
Lal8g0130 820 PANTHER VACUOLAR PROTON ATPASE A1 5 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0130 Lal-Chr8 897059 907354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0130 1 813 Primary Pumps ATPases(2) AT2G28520 80.245 0.0 1360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0130 K02154 - gmx:100793301 1508.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0130 8 897059 907354 Lal8g0130 8 897059 907354 ECH
Lal10g1245 10 18715753 18726640 Lal8g0130 8 897059 907354 LSH